Candidatus Nanopelagicus abundans: B1sIIB91_02560
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Entry
B1sIIB91_02560 CDS
T05091
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab03030
DNA replication
nab03430
Mismatch repair
nab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1sIIB91_02560
03430 Mismatch repair
B1sIIB91_02560
03440 Homologous recombination
B1sIIB91_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nab03032
]
B1sIIB91_02560
03400 DNA repair and recombination proteins [BR:
nab03400
]
B1sIIB91_02560
Enzymes [BR:
nab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1sIIB91_02560
DNA replication proteins [BR:
nab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1sIIB91_02560
DNA repair and recombination proteins [BR:
nab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1sIIB91_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
NADH-G_4Fe-4S_3
DNA_pol_B_exo1
DUF7796
Motif
Other DBs
NCBI-ProteinID:
ASY24431
UniProt:
A0A249L5S6
LinkDB
All DBs
Position
complement(489191..489835)
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AA seq
214 aa
AA seq
DB search
MALGTTSLSQATFVVVDLETTGASPNKGAAITEIGAVKVRSGEYLGNFESFVNPLSPIPD
YITQMTGITDLMLAKAPVIDEILPAFLEFAGKHNEVIIVAHNAPFDLSFLKSAAKELDIM
WPKYKTLDTVTIARQVLTKEKVPNCKLQTLAQYFGTTTQPNHRALDDAKATTEILHGLLE
RLGSFDVNTVDALMEFAKTAAHIQRQNYWGLSSI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggctttaggtactacctccttatctcaggcaacatttgtagttgtagatttggagact
actggtgcgtcccctaataaaggtgcagctattactgagattggcgcagttaaagttaga
agtggtgaatatcttggaaactttgaatcatttgtaaacccactctcaccaattccagat
tacataactcagatgactggcattactgacttaatgttggcaaaagctccagtaattgat
gagattttgccagcatttcttgaatttgctggtaaacataatgaagtgataattgttgct
cataacgcaccatttgatttaagttttcttaaaagcgctgctaaggaattagacattatg
tggccaaaatataaaacactagatacggtaactattgcccgacaggtgctaactaaggag
aaagtaccaaactgtaaacttcaaacactggctcagtactttggcactacgacgcaacct
aaccatcgggcattagatgatgcaaaagcaactactgaaattctccatggattacttgaa
cgtttaggatcttttgatgttaataccgtggatgccttaatggagtttgcaaaaactgct
gcgcatatccagcgacaaaattattggggattaagctctatctag
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