Candidatus Nanopelagicus abundans: B1sIIB91_02685
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Entry
B1sIIB91_02685 CDS
T05091
Name
(GenBank) pyridoxal 5'-phosphate synthase pdxS subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab00750
Vitamin B6 metabolism
nab01100
Metabolic pathways
nab01240
Biosynthesis of cofactors
Module
nab_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
B1sIIB91_02685
Enzymes [BR:
nab01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
B1sIIB91_02685
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
IGPS
NanE
NMO
TetR_C_27
IMPDH
Glu_synthase
Trp_syntA
FMN_dh
DHO_dh
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
ASY23820
UniProt:
A0A249L408
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Position
508388..509275
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AA seq
295 aa
AA seq
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MSKETGTARVKRGMAEMLKGGVIMDVVNVEQAKIAEDAGAVAVMALERVPADIRAQGGVA
RMSDPDMISAIQAAVSIPVMAKARIGHFVEAQILQTLGVDYIDESEVLTPADYANHIDKW
NFTIPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRTIAGEIRRLTSMRE
DELFVAAKELQAPYELVKEVASTGKLPVVLFTAGGIATPADAAMMMQLGADGVFVGSGIF
KSGDPAKRAAACVKAVTYFTDPKVIADASRGLGEAMVGINVADIPVPHRLAERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggaaacaggaacagcacgagtaaaacgcggcatggcagagatgctaaagggc
ggcgtaattatggatgttgtaaatgttgagcaagcaaaaattgccgaagatgcaggtgca
gttgcggtaatggcgcttgagcgcgtaccagcagatatccgtgcccaaggtggcgttgcg
cgaatgtctgatcctgacatgatcagcgcaatacaagcagctgtttctatcccagtaatg
gcgaaagcaagaattggtcattttgttgaagcacagattttacaaacacttggcgtggat
tacatcgatgaatctgaagttttaactccggcagattatgcaaatcatattgataagtgg
aatttcactattccatttgtttgcggtgctacaaatttaggcgaagcacttaggcgaatt
aatgaaggcgcagcaatgatcagatctaagggtgaagctggcaccggtgatgtttctaat
gcaacgacacacatgcgaactattgcaggtgagattcgacgccttacttcaatgcgcgag
gatgagttgtttgtagctgctaaagaattacaagcaccttatgaattagttaaagaggtt
gcaagcaccggaaaacttccggttgtgttatttacagcaggtggcattgccactccagct
gatgcagcaatgatgatgcaattaggagcagatggagtttttgttggctctggtattttc
aaatcaggagatccagcaaagcgcgctgcagcttgtgttaaggctgttacatactttacc
gatccaaaagtaattgcagatgcttcacgcggattaggtgaggcaatggttggtattaat
gttgctgatattccagtaccacaccgtcttgcggagcggggctggtag
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