Candidatus Nanopelagicus abundans: B1sIIB91_03025
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Entry
B1sIIB91_03025 CDS
T05091
Name
(GenBank) ATP-dependent RNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
nab
Candidatus Nanopelagicus abundans
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nab03019
]
B1sIIB91_03025
Enzymes [BR:
nab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B1sIIB91_03025
Messenger RNA biogenesis [BR:
nab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B1sIIB91_03025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
DUF6376
AAA_22
AAA_30
nSTAND_NTPase5
FapA
AAA_13
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
ASY23883
UniProt:
A0A249L4A4
LinkDB
All DBs
Position
572322..574664
Genome browser
AA seq
780 aa
AA seq
DB search
MTLTPSQNYARTKSLGKFPKTRKFAESFPFELDPFQVEACHALESGKGVLVAAPTGAGKT
IVGEFAVDLVIGSGGKCFYTTPIKALSNQKFAELTEKYGESKVGLLTGDTSINSEAQIVI
MTTEVLRNMIYANSSTINELKYVVMDEVHYLADKFRGAVWEEILIHLSDAVQVISLSATV
SNAEEFGEWLQTVRGDTEVIVSEIRPVPLYQHVLFGNRLLDLFGENLKLNPELTRLERDS
YRQVRGNWRDKPKGPKPLTRSEIVEKLDREGLLPAITFIFSRNNCDAAVRQCLAAGLRLT
NSQEKTEIRSVISRNMKNLAEEDLVVLGYYEWADALERGIAAHHAGLLPAFKVTVEELFQ
RGLVKAVFATETLALGINMPARTVVLEKLSKWNGEGHVAVSPGEYTQLTGRAGRRGIDIE
GNAVILWSNDLDSTSVGGLASTRTYPLKSSFKPTYNMSINLISQFGSERARTSLESSLAQ
FQADKAVVGLAKQIRKNESVRDGLYSEAKCHLGNFMEYAQMRGDIKKLETDSKRSKRKRA
EIEEEIGAIRKRMKNHICHTCPDRENHSRITERAQRLQREIDGLTERINTRTNVIAKRFD
RIKVILDKFGYINNDAIAKSGKMLAKIYGETDLLIAESIQSGVFNNLSPADLVSVISSCI
YESRNEEAAKVPRGDIQIALAAISKIYSKIHDAESDLNLEPMRAPDFGFCWASHKWASGQ
SLTSILKGTDLTVGDFVRSMKQIIDLLRQLRSAAPELQIIIDQALTKIDRGVIAYAGAAV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaactccatctcaaaattatgctagaactaaatcattaggaaaatttcctaag
acacgaaaatttgctgaatcttttccatttgagcttgatccgtttcaggttgaggcttgt
cacgcattagagagcggaaaaggtgttttagttgctgccccaaccggagctggtaaaacg
atagttggggaatttgctgttgatttagttattggctctggcggaaaatgtttttataca
acacccataaaagcgttatctaatcaaaaatttgctgaattaacagaaaaatatggcgaa
tcaaaagtgggcttattaactggtgatacttcaataaattcagaggcacaaattgtgatt
atgacgactgaagtcttaagaaacatgatttatgcaaattcatcgacaataaatgaactc
aaatatgttgttatggatgaggtgcactatctagcagataagtttcgtggtgcggtatgg
gaggagattcttattcatctttccgatgcggttcaagtaatttcactttcggctacagtt
tcaaatgccgaggaatttggcgagtggttacaaacagtacgaggtgatactgaggtaatt
gttagtgaaataagaccagttcctttatatcagcatgttttgtttggtaaccggctactt
gatctatttggtgaaaaccttaaactcaatccagagttgaccagattagagagagattct
tatcgccaagttagaggcaattggcgagataaaccaaagggtccgaaaccgttaacccgc
tctgaaattgttgaaaagttggaccgggaaggcttactacctgcaattacttttatattc
tctagaaacaattgtgatgctgcagttagacaatgtcttgcagctggtcttcgattaact
aattcacaggaaaaaactgaaattagatctgttatttctcgtaatatgaaaaatctggcg
gaagaggatttagttgttcttggatattatgaatgggcagatgcacttgaacgcggaatt
gctgcacaccatgcgggattactcccggcatttaaagttaccgttgaagaattatttcaa
agaggtttagtaaaagcagtatttgccacagaaaccttagctcttggaattaatatgcca
gcaagaacagttgttttagagaagctaagtaaatggaatggtgaaggtcatgtagcagtc
tcacctggggaatacacccagctaactggccgagcaggccgtcgtggtattgatattgaa
ggaaatgctgtaattctttggagtaatgatttagattcaacatctgttggcggtcttgca
tcgactcgtacctatccgttaaaaagttcctttaaacctacatataacatgagtataaat
ttgatatctcaatttggatcagagcgagctagaacttccttggaatcttcacttgctcag
tttcaagctgataaggctgtcgttgggttagcaaagcaaattcgaaaaaatgagagtgta
agagatggtttatattcagaagcaaagtgtcatctaggtaattttatggagtatgcccag
atgcgtggggacattaagaaattagagactgatagtaagcgaagcaaacgcaaacgtgct
gaaatagaggaagaaattggtgcgatccgtaagcgaatgaaaaatcatatatgccataca
tgtcctgatcgtgaaaatcattctaggattactgagcgagcacagcgactacagcgtgaa
atcgacggattaactgaacgaattaatactcgaacaaatgtgattgcaaaaaggtttgac
aggattaaagtcatactagataagtttggttatataaataatgatgctattgcaaaatct
ggaaagatgcttgcaaagatttatggcgaaactgatttgctaattgctgagtcaattcaa
tctggagtctttaacaatctatcaccagcagatttagtttcagttatatcatcttgcata
tacgagtctcgaaatgaggaggcggcaaaagtgccaaggggtgatattcaaatcgctttg
gcagctatttctaagatatattcaaaaattcatgatgccgaaagtgatttaaacctagaa
cctatgcgggcgccagattttgggttttgttgggcttctcataagtgggcgagtggccag
tctttaacttctattttaaaaggaactgatttaactgttggcgattttgtaagatctatg
aagcaaataattgatttactcagacaattacgttctgctgcacccgaacttcaaataatt
attgatcaggcactaaccaaaattgaccgcggtgttattgcctacgctggagcagcagta
tga
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