Candidatus Nanopelagicus abundans: B1sIIB91_03450
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Entry
B1sIIB91_03450 CDS
T05091
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab03030
DNA replication
nab03430
Mismatch repair
nab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1sIIB91_03450
03430 Mismatch repair
B1sIIB91_03450
03440 Homologous recombination
B1sIIB91_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nab03032
]
B1sIIB91_03450
03400 DNA repair and recombination proteins [BR:
nab03400
]
B1sIIB91_03450
Enzymes [BR:
nab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1sIIB91_03450
DNA replication proteins [BR:
nab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1sIIB91_03450
DNA repair and recombination proteins [BR:
nab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1sIIB91_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DUF655
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
ASY23964
UniProt:
A0A249L4R4
LinkDB
All DBs
Position
complement(666727..670251)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSDLTGNPKNSENFVHLHVHTEYSMLDGAAKISELVAEVARQEMPAIAMTDHGNVFGAFE
FHKSAKSAGVKPIIGIEAYVAPESRFDKRRVKWAEGGQDDVSGGGAYTHMTLLAENNQGL
SNLFKLSSLASLEGFYYKPRVDRELLSKYSKGIIATTGCAGGEIQTRLRMGAYKEAIKAA
SEYRDIFGPENFYLEIMDHSIEIEQRAFADLIKLGKELNLPQLATNDLHYTHHDDAAAHE
VLLCIQSGSTMADPKRFKFENSEFYLKSPAQMREIFKDFKQACDNTLLVAERCETTMREG
ENLLPQFPVPAGQSEDSWLIKLANDGLAIKMGNSIPTEYQDRLNFELEVMIKMGFPGYFL
VVADLCDHARKVGIRVGPGRGSAAGSLVSYSLGITGLDPIKFGLLFERFLNPERISMPDI
DLDFDERRRSEMIQYATTKYGDDRVAQIITYGTIKSKQAIKDSTRVLGYPYALGERLTKS
LPPSVMGKDISLSGIFNMDNERYGEASEFRNLYESDPDSKKIVDTALGIEGLKRQWGVHA
AGVILSKEPLLDVIPIHRRDADGAIITQFDMGACEATGLLKMDFLGLRNLSVLDDCLINI
EKNLGKKVVLESLPLSDKKTFELLSRGDTLGVFQLDSAPIRSLLRSMAPDSFEDIAAVIA
LYRPGPMGEDSHNKYADYKNGRKAPIGIHPELDMPLNEILKDTYGLIVYQEQVLAIARKV
AGFTLGRADLLRKAMGKKDKKILDKEKVHFEDGMKANGFSEDAVEKLWQTLIPFSDYAFN
RSHSAGYGLLSFWTAYLKANYPSEYMAALLTSVRDDKDKSALYLNECRRMGIKVLPPDVN
ESDSEYTPIGSDIRFGLTAIRNIGENVVASIINNRKAKSRYDSFGDFLTKVDAIVCNKKS
IESLIKAGAFDSLNHSRRGLMMVFLEALDAVSETKRAESIGQFDLFGAANSTSVSGVVLD
IPSPEWEKMMLLGYEREMLGLYVSDHPLLGVEHILRSVADFSISQISEVSHDQIITIGGL
ITQIQRKVSKQGTPWAIVTVEDLDGAVDVLFFSNAYANHGVNLVEDRIVAIRGRVDKREE
QPRISALDLTLPDLKQIPTGPLVISMEMSRCTPPVIDRMNEILRSHPGGREVHLRLVDGE
KKTVLKLDEGLKVTSSPSLSADLKTVLGPDCLVL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttaactggaaacccgaaaaattcggagaattttgtgcacctacatgtgcac
accgaatactccatgttagatggtgctgcaaaaatttctgagttagttgctgaagtagca
cgccaagaaatgccagcaattgcgatgacagatcatggaaatgtctttggtgcatttgag
tttcataagagcgctaaatctgccggagttaaaccaataattggtattgaagcttatgta
gccccagaatcaagatttgataagcgaagagttaagtgggctgaaggcggacaagatgat
gtttctggtggtggggcatatacccatatgactttgcttgctgaaaataatcagggactt
tctaatttatttaagctctcatcattagcttctttagagggtttttattacaaaccaaga
gttgaccgagagttactctcaaagtattcaaagggaataattgctacaacaggttgcgca
ggaggagaaattcagacccgattacgtatgggcgcctataaagaagcgatcaaagctgca
agtgagtacagagatatttttggtccagaaaatttctatctagagataatggatcactca
attgagattgagcaaagagcgtttgctgatttaattaaattaggtaaagagttaaacctt
ccgcaattagcaactaatgatcttcactatacacaccatgatgatgcagcagcacatgag
gtattactttgtattcagtctggttcgacaatggctgatccaaagagatttaagtttgag
aactcggagttttacctaaagagcccagcgcaaatgcgagaaatattcaaagattttaag
caagcctgtgataacacattactagtagccgagcgttgtgaaactactatgcgtgaaggt
gagaatttactgccgcaatttccagtgcctgctggacaaagtgaagatagttggttgatt
aaattagctaatgacggtttagccataaagatgggcaacagcattccaactgaataccag
gatcgtcttaactttgaattagaagtaatgattaagatgggatttccaggttacttttta
gttgtggcagatctttgtgatcatgcacgtaaggtggggattagagttggtccaggtcgt
ggatcagctgctggatctttagtttcttattctctaggaattactggacttgatccgatt
aagtttggattgttatttgagcgatttttaaatccagagcgtatctccatgcctgatatt
gacctggactttgatgagcgcagacgttctgaaatgattcaatacgcaactactaaatac
ggtgatgaccgagttgctcagataattacctacggcacaattaaatcaaagcaagcaatt
aaagattccaccagagtgctcggatatccatatgcactaggtgagcgcttaactaaatca
ctaccaccttcagttatgggtaaagatatttcactttctggcatatttaatatggataat
gagcgctatggcgaggcatctgaatttagaaatttatatgaaagtgatcctgattcaaaa
aagattgttgataccgcccttggaattgaaggattaaaacggcagtggggagtgcacgca
gctggagtgatattaagtaaggagccattacttgatgtaattccgattcatcgccgcgat
gcagatggcgccattattacccagtttgatatgggagcatgtgaagctactggtttacta
aagatggactttttaggacttaggaatctatctgtcttagatgattgcttaataaatatt
gaaaaaaatcttggtaaaaaagtggtattagaaagcttgccgctatctgataaaaagact
ttcgaattactttctcgtggtgacactctcggagtatttcaattagatagtgctccaatt
agatctttgttgcgctcaatggcacctgatagttttgaagatattgctgctgtaattgct
ctttatcgtccaggccctatgggtgaagattcacataataaatacgcggattataaaaat
ggtcgcaaagccccaattggtattcaccctgaattagatatgcctttaaatgaaatatta
aaagacacctatgggctaattgtttatcaggagcaggtgttagcaattgcacgaaaagtt
gctggtttcaccctgggccgcgctgatctactacgtaaggcaatgggaaagaaagataaa
aagatattggacaaagagaaagtgcactttgaagatggtatgaaagcaaacggcttttct
gaagatgcagttgagaagctatggcaaacattgatcccattctctgattatgctttcaat
agatcacatagcgcagggtatggactactttcattttggactgcttatttaaaagctaac
tatccatcagagtatatggctgcgttactcaccagcgttcgagatgataaagataaaagt
gcactttatctaaatgagtgcaggcgtatgggtataaaagtattgccaccggatgttaat
gagtcagattcggaatacacccctattggatctgatattagatttggattaactgctatt
cgaaatattggtgaaaatgtagttgcctcaataattaataatcgaaaggccaagagtcgg
tatgacagttttggcgatttcttaacaaaagttgatgcaattgtgtgtaataaaaaaagt
atcgaatcacttattaaagctggagcatttgactcgctaaatcattcacggcgaggttta
atgatggtttttctagaagcactagatgcagtctctgaaactaaacgggcagaatccatt
ggacagtttgatttatttggtgctgcaaattcaacaagtgttagtggagttgtattagat
attccaagccctgaatgggaaaaaatgatgttacttggttatgagcgagagatgcttggg
ctttatgtttctgatcatccactacttggcgttgaacatattttacgttcagtagctgat
ttttcaattagccaaatttctgaggttagccatgatcaaataattacaattggtggatta
attacacaaattcaacgtaaagtctcaaaacaaggcacaccatgggcgattgtgactgtt
gaagatttagatggcgcagtcgatgttttgtttttctctaatgcttatgcaaatcatggt
gttaatttagttgaagatcgaattgtggcaattagaggcagagttgataagcgtgaggaa
caacctagaatttcagcattagatttaactctgccggatttaaaacagataccaacaggc
ccacttgttatttcaatggaaatgtcgcgttgcacacctccagtaattgatcgtatgaat
gaaattttgcgatcacatccaggggggcgagaagttcatctcagacttgtagatggggag
aagaagaccgtgcttaagttagatgagggtttaaaagttacatcatcaccaagtttaagt
gctgatcttaaaactgtattaggtcctgattgcttagttctctag
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