Candidatus Nanopelagicus abundans: B1sIIB91_03665
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Entry
B1sIIB91_03665 CDS
T05091
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1sIIB91_03665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nab03400
]
B1sIIB91_03665
Enzymes [BR:
nab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
B1sIIB91_03665
DNA repair and recombination proteins [BR:
nab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B1sIIB91_03665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Nuc_N
Motif
Other DBs
NCBI-ProteinID:
ASY24002
UniProt:
A0A249L4M5
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All DBs
Position
709990..710865
Genome browser
AA seq
291 aa
AA seq
DB search
MATVKSPIRIGAHVPTSGGMATRSIEYALKIKAEAIQVFASSPRTWATSTPNPAMDEAFK
IKTAEHDIKPYVHASFLINLGSPTQSTYKNSLSATAYSLKRGREIGAHGVVVHTGSAVEE
SHVKQAWKQIHEGVMPILNNLKDDDPWLLLEPTAGQGQSLVKKLDDLTKYFEALEWHPKV
GVCLDTCHVFAAGHDIKKPGGMTETIDLLVKIVGVERIKLIHVNDSMDICGNLKDRHQNI
GKGEIGTKPFTELVSHPAILNTPLILETPGAEAEHGSEVALLKKMRDKNEK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccacagttaaaagtccgattcgtattggtgcacatgtgccgacatctggcggtatg
gcaactcgatctattgaatacgctttaaaaattaaggctgaagcaattcaagtatttgca
tcaagtccgagaacttgggcaacatctacaccaaatcctgcaatggatgaagcttttaag
attaaaactgcagagcatgatattaagccctatgtacatgcgtcttttttaattaattta
ggatctccaactcaatctacttataaaaactcactttctgctactgcatattcgctcaag
cgtggacgcgagattggtgcacacggtgttgttgtccatactggctcagctgttgaagaa
tcacatgtgaagcaagcatggaagcagatccatgaaggagtgatgccaattcttaataat
cttaaagatgatgatccttggttacttttagagccaacagctggtcagggtcaatcactt
gttaaaaaattagatgatctaacaaagtatttcgaagcccttgaatggcacccaaaagtt
ggagtttgtctagatacttgccatgtttttgcagctggacatgacattaaaaagccagga
ggtatgacggaaaccatcgatttacttgtaaaaattgttggagttgagcgaattaaatta
atacatgtaaatgactcaatggatatatgtggaaatttaaaagataggcatcaaaatatt
ggtaagggtgaaattggtacaaaaccatttactgaactggtttcacacccagcaatacta
aatactcccctaattttagagactccaggtgcagaagcagagcatggcagtgaggttgct
ctacttaaaaaaatgcgtgataaaaatgaaaagtaa
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