Candidatus Nanopelagicus abundans: B1sIIB91_04050
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Entry
B1sIIB91_04050 CDS
T05091
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nab
Candidatus Nanopelagicus abundans
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nab03016
]
B1sIIB91_04050
Enzymes [BR:
nab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B1sIIB91_04050
Transfer RNA biogenesis [BR:
nab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B1sIIB91_04050
Prokaryotic type
B1sIIB91_04050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASY24073
UniProt:
A0A249L4U0
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All DBs
Position
complement(780198..781076)
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AA seq
292 aa
AA seq
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MDGFLLIDKAGAMTSHDVVAKVRKKLDTKKVGHAGTLDPMATGVLVLGVGIATRLLPYIT
DGKKAYLATILLGVSTHTDDKEGDITFTADKSALANISDKEITNELGKFVGKTKQRPSSV
SAIKIDGKTAHARVRAGENVEIAERDIVIDEIKIINIQRPNDQIQVEISVTCSAGTYIRA
IARDLGDRLKVGGHLIKLRRNLVSPFTLDQCKSIEESALIPIGEVIEKIFPIRKLDLSQS
REISFGRVIEQNPQPGVFAAIDNQDNFVALLENKLQASQMVAAPILVKGSGQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggatggcttcctgctaattgataaagccggtgcaatgactagccatgatgttgtggca
aaagttagaaagaaattagatacaaaaaaagttggtcatgctggcacattagatccaatg
gcaactggggtattagtacttggtgttggaatcgctacacgattacttccatatattaca
gatggtaaaaaagcttatctagccacaattttattaggagtatcaacacatactgatgat
aaagaaggggatattacttttactgcagataaatctgccctagctaatatttctgataaa
gagataaccaatgagttaggcaaatttgttggaaaaactaaacaaagacctagctcagta
tcggcaattaaaattgatggaaaaactgcgcacgctagagtaagagctggtgagaatgtt
gaaattgctgaacgtgatatagtaattgatgagattaaaataattaatattcaacgcccg
aatgatcaaatccaagtagaaatatctgttacttgctcagctggtacatatatccgggcc
attgccagagatttaggtgatcgtctaaaagtaggaggtcatttgattaagttaaggcga
aacctagtttcacctttcacacttgatcaatgtaaatccattgaagaatctgcgctaatt
ccaataggtgaggtaattgaaaagatatttccaattcgaaaactggatttatcccaaagc
cgagaaatatcttttgggcgagttatcgaacaaaatccgcaaccaggggtatttgcggca
attgataaccaggataactttgtagccttgcttgaaaataaattacaggccagtcaaatg
gtggcagccccaattctagttaagggatctgggcaatag
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