Candidatus Nanopelagicus abundans: B1sIIB91_04435
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Entry
B1sIIB91_04435 CDS
T05091
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B1sIIB91_04435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nab03019
]
B1sIIB91_04435
03009 Ribosome biogenesis [BR:
nab03009
]
B1sIIB91_04435
Messenger RNA biogenesis [BR:
nab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1sIIB91_04435
Ribosome biogenesis [BR:
nab03009
]
Eukaryotic type
Pre-60S particles
RNases
B1sIIB91_04435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
PrpF
Motif
Other DBs
NCBI-ProteinID:
ASY24145
UniProt:
A0A249L5E4
LinkDB
All DBs
Position
863009..863557
Genome browser
AA seq
182 aa
AA seq
DB search
MSADLPNIIWVDCEMTGLDIQNDALVEIAVLVTDAQLNVLGTGVDLVIKCDPEKLANMQQ
VVIDMHTNSGLIKEIPNGTTLDKADEAIIAYLKKYAPVEGKSPLAGNSVYVDRAFIARDL
PLLNKYLHYRTIDVSTIKELARRWHPKTYFSAPAKDGNHRALGDIRDSIAELDYYRSAIF
LP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatcttccaaacataatctgggtcgattgtgagatgaccgggctagatatt
caaaatgatgccctagttgagattgccgtcctggtaactgatgcccaactaaatgtatta
ggcactggagttgatctagttattaagtgtgatccggagaaattagctaacatgcaacag
gttgtaatagatatgcatactaactctggacttattaaagagatcccaaatgggacaact
ttagataaagcagatgaggcgatcatcgcctatctaaaaaaatacgcacctgtcgaaggt
aaatctccactggctggtaactctgtctatgttgatcgagcctttatcgctagagatcta
cccctattaaataagtatctgcattatcgaactattgatgtctcaaccattaaagagtta
gcaagaagatggcaccctaaaacctacttctcagcccctgctaaagatggaaatcatcga
gcactcggtgatatcagagactcaattgcagagcttgattactaccgcagcgcaatattt
cttccctaa
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