Candidatus Nanopelagicus abundans: B1sIIB91_04885
Help
Entry
B1sIIB91_04885 CDS
T05091
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab03420
Nucleotide excision repair
nab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1sIIB91_04885
03430 Mismatch repair
B1sIIB91_04885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nab03400
]
B1sIIB91_04885
Enzymes [BR:
nab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1sIIB91_04885
DNA repair and recombination proteins [BR:
nab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1sIIB91_04885
MMR (mismatch excision repair)
Other MMR factors
B1sIIB91_04885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
YflT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ASY24225
UniProt:
A0A249L5M0
LinkDB
All DBs
Position
complement(945487..947130)
Genome browser
AA seq
547 aa
AA seq
DB search
MAIDNAAILADLDPDQISVVSAIRGPVCVIAGAGTGKTRVITNRIAYAINAGVTDPTKVL
ALTFTAKAAGEMRSRLRTLGISNAAARTFHSAALKQLLYFWPYAFGGQFPTLLTTKSGFI
SQAISRAEVAMPASVNALREIAGEIEWAKVLEISPDNYQEEAIASNRSVRLPNNKSENEN
LAMISQVYEAYESLKKQERCLDFEDVLLLTVGMLEEDRGVRERVRDQYRYFTVDEYQDVS
PLQQRLLNLWLGNREEICVVGDAAQTIYSFAGASSNFLLTFKNRFPNAQVFRLTRGYRCT
PEIINAANQILRQGNLVSDHGSELQSANEHGDKPKVNGFNSASDEIAYVSSEVEKLIKSQ
VDSSDIAILARTNAQLDQVKSSLNNLKITSQIRSGEKFFDRVDVRDAMRVIRSASVLPSE
IGDWYADLESVLRPFGEADYVISFLKLAKSIKENGGTNMRAFLREIEDRAEQNNPPTLPG
VTLATLHSAKGLEWKHLFLIGVSDGVLPMGNDLNEERRLFYVGVTRAKEKIQITYAGKPS
VFLEQFN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagataatgcagccatactcgctgacttagatcctgatcaaatttcagttgtt
agcgctattagaggaccagtttgtgtaattgcaggagctggtactggaaaaactagagtt
attacaaaccggattgcctatgcaattaatgctggcgtaactgatccaacaaaggtatta
gcacttacctttactgcaaaagcagcaggtgagatgagatctcggcttagaacacttgga
atatcaaatgctgcggcaagaacatttcactcagctgcattaaaacaacttttatacttt
tggccatacgcatttggtgggcaatttccaaccttactaacaacaaaatcagggttcatc
agccaggctatttcaagagctgaggtggcaatgccagcaagtgttaacgcactgcgcgag
attgctggtgaaatcgaatgggcaaaggttttagaaatatcacctgataactatcaagaa
gaagcgatcgcaagtaatagatcagttaggttgccaaataataaaagtgagaatgagaac
ctggcgatgatttcgcaagtttatgaagcctatgaatcacttaaaaaacaggagcggtgc
ttagattttgaagatgtacttttacttactgttgggatgttagaagaggacagaggcgtt
agggagcgggtaagagatcaataccgctacttcacagttgatgagtatcaggatgtttca
ccccttcagcagcgattactaaatctttggcttggaaatcgtgaggaaatatgtgtagtt
ggcgatgctgcgcaaactatctactcatttgctggggctagctcaaactttttacttaca
tttaaaaaccgattcccaaacgcgcaagttttccggctaacccgcggctatcgctgtacc
ccagagataattaatgctgccaatcaaattctgcgccagggtaatctagttagtgatcat
ggcagtgagctgcaatctgccaatgaacatggtgataagccgaaggtaaatggctttaat
tcagcctctgatgagatcgcatatgttagctctgaggttgaaaagctgattaaaagccag
gtagatagttctgatatcgcaattttggctagaaccaatgctcaattagatcaggttaag
tcctcccttaataatttaaagatcactagccaaattagatcaggtgagaagttctttgat
cgagtagatgttagagatgcgatgcgagtgattagaagtgcctcagtattaccctcagaa
ataggtgattggtatgccgatctagaatcggtgctgcgtccatttggtgaggctgattat
gtaattagctttttaaagctggctaaaagcattaaagaaaatggtggcacaaatatgcgg
gcctttttgcgagagattgaggaccgggctgagcaaaataacccacctacattgcctggg
gtaacgctagctacattacatagtgctaaaggacttgaatggaagcacctgtttttaatt
ggagtctcagatggtgtattacctatgggtaatgatttaaatgaagagcgccgccttttt
tatgtgggagttactcgggctaaagagaaaattcagattacctatgctggtaaacccagc
gtatttttagagcaatttaattaa
DBGET
integrated database retrieval system
