Candidatus Nesciobacter abundans: FZC36_00215
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Entry
FZC36_00215 CDS
T10119
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nabu Candidatus Nesciobacter abundans
Brite
KEGG Orthology (KO) [BR:
nabu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nabu03016
]
FZC36_00215 (truB)
Enzymes [BR:
nabu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FZC36_00215 (truB)
Transfer RNA biogenesis [BR:
nabu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FZC36_00215 (truB)
Prokaryotic type
FZC36_00215 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QEK38867
UniProt:
A0A5C0UGN1
LinkDB
All DBs
Position
complement(47839..49203)
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AA seq
454 aa
AA seq
DB search
MSVMNVGSKTTSLDIKKTLNETSRKKLEDRAEIKQNCILKVNKPKGVSSSDVIRIIKSTF
KSKKIGHGGTLDPMAEGVLPILFNEATKLSDIMHLLPKTYFFSVDFGYTTDTMDLEGNVT
DKNNEIPNESDLKNVLKDLIGINFQVPQKFSACKVNGKRAYELSREGKEVILKPKEINIF
TIDLLEYSCANHDHSRSLDYDQSLDSDTNSDKTIQTSECKAKACFRVSCSSGTYVRSLAA
EIASKLGCLCCVTKIYRENHSFFNYEDCLDLSEYITTKDFSSENTKEHLKEKTNSRNIKN
GGQKWIKSSKRKTNPYRIEDKKLFSVEMLKFCVNIDDIDFNRSNTKINTCTEQNPDLSSL
DIEQKLVTLEISTEHANSLKNGIPIYLSEVVSLELESPEKQSLDNILKKITENNIDNNDT
NYTLKNIIIKSNNKIIGIGYISGSTLFSQRMLAF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaatgaatgtgggatctaaaactacgtctttagacataaaaaaaactcttaat
gaaacaagcaggaagaaattagaagatagagcagaaattaaacaaaactgcatattgaaa
gttaacaaaccaaagggagtatcttcttcagatgtaataaggattataaaaagcacattt
aaatcaaagaaaataggacatggaggaacgctagaccctatggcagaaggggtccttcca
atactattcaatgaagcaacgaaattatcagacataatgcatttattacctaaaacatat
tttttttcagtagatttcggatatacaactgacacaatggatttagaaggaaatgtaaca
gataaaaacaacgaaattcctaacgagagtgatctgaaaaatgtacttaaagatttgatc
ggaataaacttccaagttcctcaaaaattctcagcatgtaaagtaaatggaaaaagagct
tatgagctttctagggaagggaaggaagtaatcctaaaacctaaagaaataaatattttt
acaattgatttgttggaatattcttgcgctaatcatgatcactctagatctttagattac
gatcagagcttagattccgacactaactctgacaaaacaattcaaaccagcgagtgcaag
gctaaagcttgctttagagtttcttgtagctcaggaacttatgttagatccttggctgca
gaaatcgcttctaagcttggctgtctttgttgcgtaactaaaatttacagagaaaatcac
tctttcttcaattatgaggattgtttggatctatcagaatatataactactaaagatttt
tcatcagaaaatacaaaagaacatttaaaagaaaaaacaaactctagaaatataaaaaat
ggaggtcaaaaatggattaagagctctaaacgaaaaactaacccatatagaattgaagat
aaaaagttattttctgtagaaatgctaaaattttgcgtaaacatagatgacattgatttt
aatcgctcaaataccaaaataaacacatgtactgaacaaaatccagatctctcaagcctt
gatatagagcaaaagctagtaactttggaaatatctactgaacatgctaatagccttaaa
aatggaataccaatctatctatctgaagtggtttcacttgagttagaaagccctgaaaag
caatctcttgataacattcttaagaagataactgaaaataatattgacaataatgataca
aattacacattaaaaaatataataataaaatctaacaataaaattattggaataggttat
atctctggatctactcttttttcacaacgtatgttagcattctga
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