KEGG   Candidatus Nesciobacter abundans: FZC36_01650
Entry
FZC36_01650       CDS       T10119                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
nabu  Candidatus Nesciobacter abundans
Brite
KEGG Orthology (KO) [BR:nabu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nabu02044]
    FZC36_01650 (tssC)
Secretion system [BR:nabu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FZC36_01650 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 T6SS_VipA
Other DBs
NCBI-ProteinID: QEK39134
UniProt: A0A5C0UJW9
LinkDB
Position
369091..371109
AA seq 672 aa
MTESIQKTLSRIRPPRVKITYDVETGGAIVKKELPFIMGVISDLYGHQEEKIDLKDRRFI
FIDRDNFNDVMSSIKPMLKIRVKDTLAKKAPDSKKAKKSDGKEEKDSKKAKSNDAASEDA
MIPLEIKFESIDDFHPVSIVNKIPELNSMIKDHVSLVDLLSKVDGNEDLDKILCDVVKSE
DKAKLIAESADISKATPEIEKIIKEGKMILQEGETVDPDKLLKAKEIVAAFVRSLDEAKE
LSNSYPYIMNRISNIDQQISLQLDEIIHNPEFQKLEASWRGLHYLVMNSETGERLKIRVL
SITRDELQSDLENAIEFDQSKLFKKVYEEEYGTLGGMPYSCLLGDFYVGRSPVDVSLIDH
ISTVAAAAHTPFLAAADPSMFDLSAFTELHYPRDLKKIFESSEMIKWNSFRDKEDSRYVN
LFLPRVLVRLPYGDDTIPVKEFSYNEKVDGLDNSKFCWGNPAFAMASRITDAFAKFGWTA
AIRGVEGGGLVENLPAYTFKTQYGDIALKCPTETIITDRREKELSDLGFITICHNKGTDK
AVFFGSQSTQKPKEYNLPEATSNALISSRLPYMLNVSRFAHYIKMIMREKIGSFASAEDI
ETYLNTWIAQYVFLSDTGSQGIKSRYPLREANIKIKTNESDPGSYSAIIYMKPHFQLEEL
TVSLRLVAKIPA
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgacagaaagtatacaaaaaactttatcaagaataagacctcctagagttaagataacc
tatgatgtagagacaggtggagctatagtaaagaaagagctccctttcataatgggagta
atatctgatctttacggacaccaggaagaaaaaatagatcttaaagatagaagatttatt
tttatagatagggataattttaacgatgttatgtcttctatcaagcctatgctaaaaatc
agagtcaaagacacactagcaaagaaggcaccagattctaagaaagctaagaaatctgat
ggaaaagaagagaaagattcaaagaaagcaaaatctaatgatgctgcatccgaagatgca
atgattcctttagaaataaagttcgaaagcattgatgattttcatccagtatcaatagta
aacaaaattcctgaattgaattctatgattaaagatcacgtatctttggtagatttactt
tcaaaagtagatggaaacgaagatttagataaaattctatgcgatgtagtaaaatctgaa
gataaagctaaactaatagcagaatcagcagatatttctaaagcaactccagaaatagaa
aaaatcataaaagaaggaaaaatgatcctacaagaaggagaaactgtagaccctgacaag
cttctaaaagctaaagaaattgtcgcagcttttgtaagatccttggatgaagctaaagag
ttgagtaactcctatccatacataatgaatagaatttcaaacatagaccaacaaatctcc
ttgcaacttgacgaaataattcacaatccagagtttcagaaattagaagcttcttggaga
gggctacattatttagtcatgaattctgaaactggtgaaagattgaaaatcagagtctta
tctattacaagagatgaattacaatctgatctagaaaatgctatagagttcgatcaaagt
aaattattcaaaaaagtttatgaagaagaatatggaacattgggtggaatgccttactct
tgtcttctaggtgatttctacgtaggaagaagtcctgtagatgtttctttaatagatcat
ataagcactgttgctgctgctgcacacacaccattccttgctgctgctgatccatctatg
tttgatttgtctgcattcacagaacttcactacccaagagatttgaaaaaaatcttcgaa
agttcagaaatgatcaagtggaacagctttagagacaaagaagactctagatacgtaaac
ttgttcttaccaagagttcttgtaagacttccttacggtgatgataccattcctgtaaaa
gaattttcttacaatgaaaaagtcgatggactagataactctaagttctgttggggtaac
ccagcttttgcgatggcttcaagaattacagatgcatttgcaaaattcggttggactgct
gctatcagaggtgtagaaggtggtggattagtagaaaatctacctgcatacacatttaag
acacaatatggtgacatagctcttaaatgccctacagaaacaatcataactgacagaaga
gaaaaagaattaagtgatttaggtttcataacaatttgtcataacaaaggaacagataaa
gctgtattctttggatcacaaagtacacaaaaaccaaaagagtacaaccttccagaggca
acttcaaatgcgttgatctcttcaagattgccttacatgcttaatgtatctagatttgct
cattatataaaaatgatcatgagagaaaaaataggttcattcgcctctgcagaagatata
gaaacatacttgaacacatggattgcacaatatgtattcttatcagacacaggaagccaa
ggaataaaatccaggtatccattaagagaagcaaatataaagatcaaaacaaatgaatct
gatccaggatcttatagcgctattatatacatgaaacctcacttccagttggaagaacta
accgtttcattaagactagtagctaagattcctgcttaa

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