Candidatus Nesciobacter abundans: FZC36_02135
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Entry
FZC36_02135 CDS
T10119
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nabu Candidatus Nesciobacter abundans
Pathway
nabu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nabu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FZC36_02135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nabu03400
]
FZC36_02135
Enzymes [BR:
nabu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FZC36_02135
DNA repair and recombination proteins [BR:
nabu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FZC36_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HdcB
Motif
Other DBs
NCBI-ProteinID:
QEK39214
UniProt:
A0A5C0UK34
LinkDB
All DBs
Position
479056..479796
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AA seq
246 aa
AA seq
DB search
MNKMKNRNIFFSLVNGSNLSPKQKYIPVKNYSNVLSEEINIQENKQNQDTILSEKNNDDD
LEFSSINELRTSMAKNIDLEFKKDATTMVFADGDPNSKIMIVGEAPGEEEDKKGKPFIGD
SGKLLEAMFEAAHIKRKHMYITNVIPWRPPANRTPTKEEISKSQPYLLEHIRIINPKILV
LVGSIAMKAFTNTSEAITKSRGIFKEHRNCLYIPIFHPSYLLRSPSKKKISWNDILQIKE
KYKELI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaatgaaaaatagaaatatatttttttctttagttaatgggtcaaatttaagc
cctaaacaaaaatatattcctgttaaaaattatagtaatgttttatcagaagaaataaac
attcaagaaaataagcaaaatcaagatactattctgtcagaaaaaaacaatgatgatgat
ctagaattcagttctataaacgagcttagaacaagcatggcaaaaaatatagatttagag
ttcaagaaagatgcaactaccatggtatttgcagatggagaccctaactcaaaaataatg
atagtcggagaagcacctggagaagaagaggataaaaaaggcaaaccattcattggagat
agtggaaaacttttagaagcaatgttcgaagctgcacatataaaaagaaaacatatgtat
ataactaatgtaattccatggaggcctcctgctaatagaactcctacaaaagaagaaatt
tcaaaatctcaaccttatttactagaacatataagaattataaatcctaaaatattggtt
ttagttggatctattgctatgaaagcttttactaacacttcagaagccattacaaaatct
agaggcatattcaaagagcatagaaattgtctttatatccctattttccatccttcttat
ttgttaagatctccaagcaaaaaaaagatatcatggaatgatattttacaaataaaagaa
aaatataaagaattaatataa
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