Candidatus Nesciobacter abundans: FZC36_02545
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Entry
FZC36_02545 CDS
T10119
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nabu Candidatus Nesciobacter abundans
Pathway
nabu03420
Nucleotide excision repair
nabu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nabu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FZC36_02545
03430 Mismatch repair
FZC36_02545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nabu03400
]
FZC36_02545
Enzymes [BR:
nabu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZC36_02545
DNA repair and recombination proteins [BR:
nabu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZC36_02545
MMR (mismatch excision repair)
Other MMR factors
FZC36_02545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEK39287
UniProt:
A0A5C0UHR6
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All DBs
Position
complement(573336..575303)
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AA seq
655 aa
AA seq
DB search
MLSNLNPSQREAVDCRKNLLIVAGAGTGKTKTIVSKICHYISLGIVMPDEIIATTFTNKA
TQEMHSRIKSEIGDDVDLISIGTFHRLSLKIVQNHAKLLNIEGCNLIAYEDQAQVMRKVL
SNIKNKDIKPSHALETVQRAKEKNDYASLNHTYANIAYAYNDMLREMNALDFADLISKTI
ELWRNHKDILDHYRKKYKLICVDEYQDINDAQYEWISLLSCDDNQICCVGDPDQSIYSFR
GSNMSHILNFTRDFKNSEKIVLEENYRSTDKIISNSNHLISKNKNRIEKFLVSTLKSDEL
VDIFVGMHGKEEAFEICRIIAKIKSKEEVKSSIALLFRTSTNMHLFEEALLNANIKYSIV
GSVQFMDRAEIKDAVSYVRFLSNPNDFFAFSRMIQAPKRGIGSATVAKISENASSNIEDK
IRGVLDSFTSRTKNKLSEFLAQWERWRSILSKDLSDSKKLRKIMEIIVNESGLYESLESD
RKENVDKWLETLDSFEDPESYVNHILWNNLKADDEHDVKLMTVHAAKGLEFDYVFLPVFE
DGIFPHSRSFENIEEERRLAYVALTRAKKKLFITYAQSRVFQGRYMNAQPSRFIREMDSK
SLQFQSFKHKTLAGKKVYHEEFGYGTIEESGMQCAKVCFGSVSKVVDIKKLVECD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgttatctaatttaaatccttcacaaagagaggcagttgattgtagaaaaaatctactt
atagttgctggagcaggaactggaaaaactaaaaccattgtaagcaagatatgtcattac
atttctttaggtatagttatgcctgatgagataattgcaactacttttacaaacaaagcc
actcaggaaatgcattctagaataaaatctgaaataggagatgatgttgatttaatatct
ataggtacttttcacagactttctctaaaaatagttcagaatcatgcaaaattactgaat
atagagggttgtaatttaatagcttatgaagatcaagctcaggttatgagaaaggttttg
agtaatataaagaataaagatataaaacctagtcatgcactagaaaccgtacaaagagca
aaagaaaaaaatgactatgcaagtcttaatcatacttatgcgaacatagcttatgcttac
aacgacatgcttagagagatgaatgctttagatttcgctgacttaatctctaaaactata
gagctatggagaaatcataaggatattctggatcattacagaaaaaaatataagttaatc
tgtgtggatgagtaccaagatataaatgatgctcagtatgaatggattagtcttttatct
tgcgatgataaccaaatttgttgtgttggagacccagatcaatctatatattcatttaga
ggttctaatatgagtcatatattgaattttactagagattttaaaaacagtgagaaaata
gtgttagaagaaaattatcgttcaacagataaaataatctcaaattcaaaccacttgatt
tctaagaataaaaatagaatagagaaatttttggtttctacgcttaaatcagatgaatta
gtagatatttttgtcggaatgcacggaaaagaagaagcttttgagatttgtagaataata
gctaaaattaaatctaaagaagaggtaaaaagttccatagcactgctatttagaacttct
actaatatgcatttatttgaagaagctttgttaaatgcaaatataaaatattctattgta
ggatcagttcagtttatggatagggctgagataaaagatgctgtttcttatgtaagattt
ctttcaaatccgaatgatttcttcgcattcagcagaatgatacaagcccctaagcgtgga
attggttcagctacagtggcaaagataagtgagaatgcatcaagcaatatagaagacaaa
atcagaggtgttttggattcttttacatcaagaactaaaaataaattgtctgaattctta
gctcaatgggagagatggagatcaattttgagtaaagatctttctgattctaagaaatta
agaaagataatggaaataattgtgaacgaatctggattatatgaatctctagagtctgac
agaaaagagaacgtggataaatggcttgaaactttagatagctttgaagatcctgaatct
tacgttaatcatatcttatggaacaatttaaaagcagatgatgagcatgatgtaaagctt
atgactgttcatgctgctaaaggattagaatttgattatgtgtttcttcctgttttcgaa
gatgggattttcccgcactctagatctttcgaaaatatagaagaagaaagaaggcttgct
tacgtagcgcttacaagagctaaaaagaaactgtttataacttatgctcaaagtagagtt
tttcaaggtaggtacatgaatgcccagccttctagatttataagagagatggattctaaa
agtttacaatttcagtcctttaagcataaaactttggctgggaagaaagtttatcatgaa
gaatttgggtacggaactatagaagaatcaggcatgcaatgtgcaaaagtatgttttgga
agtgtttcgaaagttgtagatataaaaaaattagtagaatgtgattga
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