Nanohaloarchaea archaeon SG9: AQV86_02270
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Entry
AQV86_02270 CDS
T04498
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nac
Nanohaloarchaea archaeon SG9
Pathway
nac03022
Basal transcription factors
nac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AQV86_02270
09124 Replication and repair
03420 Nucleotide excision repair
AQV86_02270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nac03021
]
AQV86_02270
03036 Chromosome and associated proteins [BR:
nac03036
]
AQV86_02270
03400 DNA repair and recombination proteins [BR:
nac03400
]
AQV86_02270
Enzymes [BR:
nac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AQV86_02270
Transcription machinery [BR:
nac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AQV86_02270
Chromosome and associated proteins [BR:
nac03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AQV86_02270
DNA repair and recombination proteins [BR:
nac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AQV86_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AOV94728
LinkDB
All DBs
Position
complement(405282..407117)
Genome browser
AA seq
611 aa
AA seq
DB search
MNLFPFNEKREKQEKMMEKVRSAIDREGTVVSHAPTGLGKTAASLTPGLEKALQGDEKVL
FLTPRNSQHQIALETAKKINERQDANVKTVDLIGKDHLCEADSISRTGEGPDCPRHDNTF
TDSHELTDKAKKKIKELQNEALTAEEVKKRCKDVCAYQISLYMTQKADLIVADYFHIFHP
AVRDIVLEKAEIDLSDTIIVVDEAHNLPSRTRSLFSNNLSVPNIDRAITEAEKFGYYPEQ
ENLEQLKNEVLRLGREKLGQQEHEDTVKKKDLKDPVDNFHSYEELIVDLEAAAEEVHEEK
EKSYCAGIAEFLEAWKGKDKGFVRSIKRVIGDGGDRRIQINYSCLNPQISTEKPLNGSKA
SVLMSGTLTPPSMYVDLLGIDEEKNESVEFGSPFPEENKLELVIPTLTTKYEERDESMRQ
KYAWYLSKSFEAVEGNCAVFFPSYSFMYKIKEELQNHTDRKIFTEDRSLDKEGKQEVLDN
FAATASEGDSVLLGVAAGSFGEGIDYPGEKLKGVFIVGLPLQRPDLETKGLIDFLDKKFG
KGWDYGYSYPAMNRAVQAAGRCIRSKEDEGVIIYMDKRYSWSNYRKVFPPETNLKKSRAP
WKEIQEFFDQT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatctattcccattcaacgagaaaagggaaaaacaggaaaagatgatggagaaagtc
cgttcagcgatagacagggagggaacagttgtatcacatgcgccaacaggccttgggaag
accgcagcatcactgacaccaggcctggagaaagctcttcagggagacgaaaaagttctc
ttcctgacacccaggaacagccagcaccagatcgcacttgagacagcgaaaaaaataaac
gaaagacaggatgcaaacgtcaaaactgtagatttaatcggaaaagaccatctatgtgaa
gcagactccatatcgaggacaggcgaaggccctgactgtccccgccacgacaacactttt
actgatagccacgaattaacggataaggccaagaaaaagatcaaggaattacagaacgag
gccttgacagctgaagaggttaagaaaagatgtaaggacgtatgtgcctaccagatctcg
ctttatatgacccagaaggcagatcttattgtcgctgactatttccacatatttcatcct
gcggtgcgggatatcgtacttgagaaagcggagatagatctgagcgatactatcatagtg
gttgatgaagcccataatctgccttcgaggacgagaagcctgttctccaacaacctctcc
gtacctaacatagacagggcgatcactgaagcggaaaagttcggttactaccctgaacag
gagaacctcgagcagttaaagaacgaagtcctcagactcggccgtgaaaaacttggacag
caggaacacgaagacactgtaaagaaaaaagatctgaaagatcctgtcgataacttccac
agctacgaggaactgatagtggaccttgaagcagccgctgaagaagtacatgaggaaaaa
gaaaaaagttactgtgcaggtatcgcagagttcctggaggcctggaaaggcaaagacaaa
ggattcgtacgctccataaaacgagtaataggcgatggaggagacagacgcatccagatc
aactactcctgtctcaacccacagatctccacagaaaaaccactgaacggatcaaaggcc
tcagtcctgatgtccgggaccctgacacctccctccatgtacgtcgaccttctcggcata
gacgaggaaaaaaacgagtcagtcgaattcggatcacccttcccggaagagaacaagcta
gaactagtaattccaacgctgacaaccaaatatgaggaaagagacgaatccatgcgacag
aaatacgcctggtacctctccaaaagcttcgaagccgtcgaaggaaactgcgcagtattc
ttcccgagctacagcttcatgtacaaaataaaagaagaactacagaaccacacagacaga
aaaatattcactgaagaccgcagcctcgacaaagaaggcaaacaggaagtcctcgacaac
ttcgcagccacagcaagcgaaggagactccgtcttactcggagtcgccgcaggctccttc
ggagaaggaatagactacccaggagaaaaactcaaaggcgtattcatcgtaggcctcccc
ctccaaagacctgacctagagaccaaaggcctaatcgatttcctggacaaaaaattcggc
aaaggctgggactacggatacagctatcccgcaatgaaccgagcagtacaggccgcagga
cgctgcattcgctcaaaagaagacgaaggcgtaataatctacatggataaaagatactca
tggagcaactaccggaaagtctttcctcccgagacaaatctgaaaaaaagcagggcaccg
tggaaggaaatacaagaatttttcgaccaaacatag
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