Nanohaloarchaea archaeon SG9: AQV86_02440
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Entry
AQV86_02440 CDS
T04498
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nac
Nanohaloarchaea archaeon SG9
Pathway
nac03022
Basal transcription factors
nac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AQV86_02440
09124 Replication and repair
03420 Nucleotide excision repair
AQV86_02440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nac03021
]
AQV86_02440
03400 DNA repair and recombination proteins [BR:
nac03400
]
AQV86_02440
Enzymes [BR:
nac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AQV86_02440
Transcription machinery [BR:
nac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AQV86_02440
DNA repair and recombination proteins [BR:
nac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AQV86_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
SNF2-rel_dom
DEAD
RecX_HTH1
AAA_22
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOV94761
LinkDB
All DBs
Position
461304..462938
Genome browser
AA seq
544 aa
AA seq
DB search
MKEEKLSEMSREELEEKILEMEAEEEVVFFEPQREIILTNPGDETLNRISSIAHMETSSA
DHYKFQVKEMDIWNSDKSLEEMKEIYTDLIGSRPRFLEWVERTYEKQEIFSIEHKGRYHA
LVASDKERMEWARGIDKVRDNLAVDLSDTQSRIAMGSKSRAEIKQALLKKGYPVEDNSKF
RESDTKIGADLAEDIELRDYQEEYVEKAYEKKAAVLANPAGSGKTVTAIGLMSKIDAPTL
VLVPQRNLVGQWKRELLDKTRLTEDQIGEYHGDEKKMNDVTIATYHMAGEKTDIFRKEWG
LIIFDEVHHIPSQLFRKTASLQSTRRVGLSASPVREDTKEKDIFALIGQEIGSDWARFFN
QGYVKKPEVDIQLVEWASDFYRHKYEQASGIKKAIVASKNPAKNQVLEDLLDEHEDRKTI
IFCDWLDQGEDLSEEYDIPFISGETDFEEREKYFQRFRDDELTTIIVSRIGDEGLDLPDA
EIGIIMSGQGGSRRQATQRAGRVMRPFGDAEVYMVATKGSNEEDFVKQQVELLKEKGVSV
SVKE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaaaaactttctgagatgtcgcgtgaagaacttgaggagaaaattctggag
atggaggctgaggaggaagtggttttcttcgaacctcagcgagagataattttaaccaat
cccggcgatgaaacgctgaacaggatctccagtatagcccatatggagacgtcttcagcg
gatcattacaagttccaggtcaaggagatggatatctggaactcggataagagcctggag
gagatgaaagaaatctataccgatctgatcggttcaaggcctcgattccttgaatgggtg
gagagaacgtatgagaaacaggaaatcttctccatagaacataaaggacgttaccacgct
ctcgtagcttctgacaaggaaaggatggagtgggcgcgtggaatagataaagttcgagat
aacctggctgtagatctctctgatacacagtcaagaattgccatgggaagtaagagcagg
gctgagatcaaacaggccttgttaaagaagggttatcctgttgaggataactctaaattc
cgtgaatcagatactaagatcggggcagatcttgcagaagatatagagttaagagattac
caggaagaatacgtggaaaaggcctacgagaaaaaggcagcagtcctggccaatcctgct
ggctcaggtaagactgttactgctataggccttatgtcgaagatcgatgctcctacgctg
gttctggttcctcagaggaatcttgtgggtcagtggaaacgtgagttgctggataagacc
aggttgactgaggatcagatcggtgagtaccatggcgatgagaagaagatgaatgatgtg
actatcgcaacttatcatatggcgggtgagaaaactgatattttcaggaaggagtggggc
ttgatcatctttgatgaggtccatcacatcccgtcccagctgttcaggaagacagcttcg
cttcaatcgacccgacgtgtaggcctgtccgcatcacctgtaagagaagacaccaaggag
aaggacatcttcgccctgattggacaggagatcggaagcgactgggcacgtttcttcaac
cagggatatgttaagaagcctgaggtagatattcagcttgtggaatgggcctctgatttt
tacaggcataaatacgaacaggcctccgggatcaagaaagctattgtcgcctcgaagaat
ccggccaaaaatcaggtgctggaagatctgctggatgagcatgaggatagaaagactatc
attttctgtgactggctagaccagggagaagatctctcagaggaatacgatataccgttt
atctccggggagaccgatttcgaggaaagagagaagtacttccagaggttcagggacgat
gaacttactacgataatcgtctcaaggatcggagacgaaggccttgaccttccggacgct
gagatcgggattattatgtctggacagggcggttcaagacgtcaggcaacccagcgagca
gggagagtcatgaggcctttcggggacgctgaggtctatatggttgcgacgaaaggctct
aacgaggaggattttgtcaagcagcaggtggaattgctgaaggagaaaggagtctctgtt
tctgtcaaggagtga
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