Nanohaloarchaea archaeon SG9: AQV86_03920
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Entry
AQV86_03920 CDS
T04498
Name
(GenBank) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
nac
Nanohaloarchaea archaeon SG9
Pathway
nac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQV86_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nac03019
]
AQV86_03920
Messenger RNA biogenesis [BR:
nac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AQV86_03920
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AQV86_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_1
KH_6
ECR1_N
ECR1_N_2
KH_2
RRP40_S1
KH-I_KHDC4-BBP
PapC_C
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AOV95044
UniProt:
A0A1D8MSV2
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All DBs
Position
731086..731775
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AA seq
229 aa
AA seq
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MSRVKEEDDLVTPGDMITDADALSATSGAYEENNKIYSKHLGTVHFNGQEVEVRPMSGRY
MPEEGDTIIGEVTRVSYSRWTVEFNSAYEGSLNIADATDEYVDLDEDDLSDFFEVGDAVV
IKVKSVTDGMDVDLSMKDKRCRKLEGGRVIGIAPSKVPRVIGKKGTMVKQINEKTNCNII
VGQNGQVWISGDKANLAARAVKKVEREAHTENLTDRISEWLEEELEGEK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgtgaaagaagaagatgaccttgtaactccaggagatatgataactgatgca
gacgctctgtctgcgacttctggtgcttacgaagaaaataataaaatctattcaaaacac
ctgggaactgtccatttcaatggccaggaagttgaggtaaggcctatgtccggtcgttac
atgcctgaggaaggtgatacgatcatcggagaggtcacgagagtcagttactctcgctgg
actgtcgagttcaactctgcttatgaaggcagtttgaacattgctgatgcaacggatgag
tacgtcgatcttgatgaagacgatctttctgacttctttgaggttggagatgctgtcgtg
atcaaggttaagtccgttactgatggcatggacgtcgatctttctatgaaagataagaga
tgtcgcaagcttgaaggaggacgtgtgatcgggattgcaccttccaaagttccccgtgta
atcggtaagaagggaaccatggttaaacagatcaacgagaagaccaactgcaacatcatt
gtcggccagaacggacaggtctggatctcgggcgacaaagccaatcttgcagcgagagct
gtcaaaaaagtagaaagagaagcccacacagaaaacctgactgacagaataagtgaatgg
cttgaagaagaactagagggtgaaaagtaa
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