KEGG   Nanohaloarchaea archaeon SG9: AQV86_03920
Entry
AQV86_03920       CDS       T04498                                 
Name
(GenBank) hypothetical protein
  KO
K03679  exosome complex component RRP4
Organism
nac  Nanohaloarchaea archaeon SG9
Pathway
nac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AQV86_03920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nac03019]
    AQV86_03920
Messenger RNA biogenesis [BR:nac03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AQV86_03920
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     AQV86_03920
SSDB
Motif
Pfam: RRP4_S1 KH_1 KH_6 ECR1_N ECR1_N_2 KH_2 RRP40_S1 KH-I_KHDC4-BBP PapC_C KH_KhpA-B
Other DBs
NCBI-ProteinID: AOV95044
UniProt: A0A1D8MSV2
LinkDB
Position
731086..731775
AA seq 229 aa
MSRVKEEDDLVTPGDMITDADALSATSGAYEENNKIYSKHLGTVHFNGQEVEVRPMSGRY
MPEEGDTIIGEVTRVSYSRWTVEFNSAYEGSLNIADATDEYVDLDEDDLSDFFEVGDAVV
IKVKSVTDGMDVDLSMKDKRCRKLEGGRVIGIAPSKVPRVIGKKGTMVKQINEKTNCNII
VGQNGQVWISGDKANLAARAVKKVEREAHTENLTDRISEWLEEELEGEK
NT seq 690 nt   +upstreamnt  +downstreamnt
atgtcacgtgtgaaagaagaagatgaccttgtaactccaggagatatgataactgatgca
gacgctctgtctgcgacttctggtgcttacgaagaaaataataaaatctattcaaaacac
ctgggaactgtccatttcaatggccaggaagttgaggtaaggcctatgtccggtcgttac
atgcctgaggaaggtgatacgatcatcggagaggtcacgagagtcagttactctcgctgg
actgtcgagttcaactctgcttatgaaggcagtttgaacattgctgatgcaacggatgag
tacgtcgatcttgatgaagacgatctttctgacttctttgaggttggagatgctgtcgtg
atcaaggttaagtccgttactgatggcatggacgtcgatctttctatgaaagataagaga
tgtcgcaagcttgaaggaggacgtgtgatcgggattgcaccttccaaagttccccgtgta
atcggtaagaagggaaccatggttaaacagatcaacgagaagaccaactgcaacatcatt
gtcggccagaacggacaggtctggatctcgggcgacaaagccaatcttgcagcgagagct
gtcaaaaaagtagaaagagaagcccacacagaaaacctgactgacagaataagtgaatgg
cttgaagaagaactagagggtgaaaagtaa

DBGET integrated database retrieval system