KEGG   Nanohaloarchaea archaeon SG9: AQV86_05040
Entry
AQV86_05040       CDS       T04498                                 
Name
(GenBank) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nac  Nanohaloarchaea archaeon SG9
Pathway
nac03030  DNA replication
nac03410  Base excision repair
nac03420  Nucleotide excision repair
nac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AQV86_05040
   03410 Base excision repair
    AQV86_05040
   03420 Nucleotide excision repair
    AQV86_05040
   03430 Mismatch repair
    AQV86_05040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nac03032]
    AQV86_05040
   03400 DNA repair and recombination proteins [BR:nac03400]
    AQV86_05040
Enzymes [BR:nac01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AQV86_05040
    6.5.1.6  DNA ligase (ATP or NAD+)
     AQV86_05040
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AQV86_05040
DNA replication proteins [BR:nac03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AQV86_05040
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AQV86_05040
DNA repair and recombination proteins [BR:nac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AQV86_05040
   NER (nucleotide excision repair)
    Other NER factors
     AQV86_05040
   MMR (mismatch excision repair)
    Other MMR factors
     AQV86_05040
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Tex55 Phage_min_cap2 RNA_ligase
Other DBs
NCBI-ProteinID: AOV95254
LinkDB
Position
complement(922271..923944)
AA seq 557 aa
MEFSKITEAFEKLDQTQKTLEKTDILAELFEESGEQLPQVVLMCTGTPFPAWKDLDLGVS
SKTLVKIISKATGRSEKEVEKEWKEQGDLGLAAQTMVEKKTQQRLMSQEITVQKTFERMQ
KVAEMESEGLNSSVNQDKKQKELADLISSSEPREAKYLARIIINNLRLGVGEGTIRDALS
EAFFDGKHFEDIQKAYDFSNDFAEVAKACREGLEQVNSLELELYRPVKSMLAKNVDTIEE
GFEEVGEPASINYKYDGMRAQIHVKEGEVKVFTRRLDDVTEQFPDVVEAVEENIESDNCI
LDTEIVGYDPEDGGMIPFQRLSKRIKRKYDIQKLKEEIPVEVRPFDLIYLDEPILQRPYS
ERWEKLKSVVNEQEEEMKLVDNDITLEAERVQEMQQASLSDGHEGIMMKNLEAEYKPGNR
VGYMVKLKPVMETLDLAIVGAKWSEGRRSNWLGRLFLGCYDKENNEYLEVGKMATGLTDE
QFQEITEKLKPLITNEEGRKVDVRPEVIVEAEYEEIQESPTYSSGYALRFPRMKQFREDK
EKADSLEKIKGLYQDQN
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggaattctcaaaaatcacagaggccttcgaaaaactggaccagacacagaagacactg
gaaaagacagatatcctggccgaactattcgaggaatcaggagaacagctacctcaggta
gtcctgatgtgtacaggaacaccgttccccgcatggaaagacctggacttaggcgtatcc
tcaaagacgctcgtaaagataatatcaaaagccacaggaagaagcgaaaaagaagtagaa
aaagaatggaaagaacagggagacctaggcctcgcagcacagacgatggtcgaaaaaaag
acacagcaaagacttatgagtcaggaaataacagtacagaagacctttgaacgcatgcag
aaagtagcagagatggaaagcgaaggcctcaactcctcagtcaaccaggacaagaaacag
aaggaactggccgacctcatctcctcatcggaaccgagagaagcaaaatacctcgcaagg
ataatcataaacaatctacgcctcggagtcggtgaaggaacaattagagacgctctttcc
gaggccttcttcgatggaaaacacttcgaagacatacagaaagcatatgatttctccaat
gactttgcggaggtggcaaaagcttgtcgtgaaggccttgaacaggttaactcccttgag
cttgagctttacaggcctgtgaaatcaatgcttgcgaaaaacgtcgatactatcgaggaa
gggtttgaggaggtcggagaacctgcatctatcaattacaagtacgatgggatgagagct
cagatacatgtgaaggagggcgaggtcaaggtcttcacccgccgattagatgatgtcacg
gagcagttcccggacgtggttgaggcagtggaggagaacatcgaatcagataactgtata
cttgatactgagatcgtcggttacgaccccgaggacggcggtatgataccgttccagagg
ctatcgaaaaggataaagagaaaatacgatatccagaagctcaaagaagagatacctgtc
gaggtaaggcctttcgacctgatttacctggatgaaccgatccttcagaggccttacagc
gagcgctgggaaaaactcaagtctgtagttaacgaacaggaggaagagatgaagttagtt
gataacgatatcaccttggaggcagagcgtgtacaggagatgcaacaggcctctctaagt
gacggacacgaaggtatcatgatgaagaatcttgaagctgagtacaaacccggcaaccgg
gtcggatacatggtcaagttaaagcctgtgatggagacactggacctcgccatcgtcggc
gcgaaatggagcgagggaagaagaagcaactggctcggacgtcttttcctcggctgttac
gacaaggaaaacaatgaatacctggaagtcggaaaaatggcgacaggcctcaccgatgaa
cagttccaagaaatcacagaaaaactgaagcccttgataacaaatgaagaaggaagaaaa
gtcgatgtaaggcctgaagtcatagtggaagcagagtatgaagagatccaagaaagtcct
acatactcatcgggctacgcactgcgtttcccgaggatgaaacagttccgggaagacaag
gaaaaagcagattctctggaaaaaataaaaggcctctaccaagatcagaactag

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