Nisaea acidiphila: NUH88_02220
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Entry
NUH88_02220 CDS
T08369
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
naci
Nisaea acidiphila
Pathway
naci02020
Two-component system
naci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NUH88_02220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NUH88_02220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
naci02022
]
NUH88_02220
02035 Bacterial motility proteins [BR:
naci02035
]
NUH88_02220
Two-component system [BR:
naci02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NUH88_02220
Bacterial motility proteins [BR:
naci02035
]
Flagellar system
Flagellar assembly proteins
Others
NUH88_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_16
AAA_3
AAA
AAA_19
AAA_22
MCM
nSTAND3
HTH_50
HTH_Tnp_ISL3
AAA_7
AAA_18
AAA_2
ATPase
SLFN-g3_helicase
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
UUX50515
UniProt:
A0A9J7AS98
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All DBs
Position
447768..449237
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AA seq
489 aa
AA seq
DB search
MRLLIVGTLGGHISAAGQIALKKGAKVSHLDTVDGAMHALRSGQGADLVMIDVAQPVAKL
LRAMNQERINTPVVACGLENDSDAAVAAIKAGAKEYIPLPPNAELIAAVLQAVTEEQSSV
VFQDPIMGAVLKLADQIAPSDASVLITGESGTGKEVLARYLHDKSKRSDKQFVSVNCAAI
PDNLLESELFGHEKGAFTGAVARRIGKFEEANGGTLLLDEISEMDIRLQAKLLRAIQERE
IDRVGGNTPVKVDIRLLATSNRDLERHVRDGNFREDLYFRLNVFNLQLPPLRQRPADIKL
LAEHFAKKYAEANSVPERPLSDEAVKRLQGHHWRGNVRELENTMHRAILLASGDEIGAEA
IILTGEQMAPAAPEAPPLAAAPAPKPVEQPATNAFQPASFDEPEPVPAASPAEPAPAESD
PAGGDLVGRTVADVERQLIIDTLTHCLGNRTHAANILGISIRTLRNKLKAYSEDGINVPP
PGEADRATV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgctgatcgtcggcactctgggcggacatattagcgcagcgggtcagatcgcc
ctcaagaaaggggcgaaggtaagccatctcgacacggtggacggggccatgcacgcgctg
cgcagcggccagggcgccgacctcgtgatgatcgacgttgcccagccggtggccaagttg
ctccgggcgatgaaccaggagcggatcaacacgccggtggtcgcctgcggactggagaac
gactccgacgccgcggtcgcggcgatcaaggccggggcgaaggaatacattcccctgccc
ccgaacgcggaactgatcgccgccgtgctccaggcggtcacggaagaacagagctccgtg
gtctttcaggatccgatcatgggagcggtcctgaagcttgcggaccagatcgccccatcg
gatgccagcgtgctcatcaccggcgaatccggcaccggtaaggaagtgctcgcacgctat
ctgcacgacaagagcaaacgttccgacaagcagttcgtttccgtaaactgcgcggcgatc
ccggacaatcttctggaatccgaactgttcggccatgagaaaggcgccttcaccggcgcc
gtcgcgcgccgtatcggcaaattcgaggaagcgaacggcggcaccctgctgctcgacgaa
atcagcgagatggacatccgcctgcaggccaagctgctgcgcgcgatccaggagcgggaa
atcgaccgggtaggaggcaatacgccggtgaaggtcgatatccgcctgcttgcgacctcc
aaccgggacctggagcggcatgtgcgtgacgggaatttccgcgaggatctctatttccgc
ctcaatgtcttcaatctgcaactcccgccgctgcgtcagcgcccggcggacatcaagctc
ctggccgagcatttcgcgaagaaatatgccgaggccaacagcgtgccggagcgtccgctg
agcgacgaagcggtaaaaaggcttcagggccatcattggcgcggcaatgtgcgcgagctg
gaaaacaccatgcaccgcgccatcctgctcgcctccggcgacgagatcggtgcggaggcg
atcatcctgaccggcgaacagatggccccggcagcgccggaagccccgccgcttgccgcc
gcaccggctccgaaaccggtagaacagccggcgacgaacgcgttccagccggcctccttc
gacgaaccggagccggttccggcggcctcacccgccgaaccggcgcctgcggagagcgat
ccggcgggcggcgaccttgtcggccgcaccgtcgccgacgtggagcgccagctcattatc
gacactctgacccattgcctcggcaaccggacccatgccgcgaatatcctcggcatctcg
atccggaccctgcgcaacaagttgaaggcctattccgaggacggcatcaacgtaccgcct
ccgggcgaagccgaccgggccacggtctga
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