Nisaea acidiphila: NUH88_03895
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Entry
NUH88_03895 CDS
T08369
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
naci
Nisaea acidiphila
Pathway
naci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NUH88_03895 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
naci03019
]
NUH88_03895 (recQ)
03400 DNA repair and recombination proteins [BR:
naci03400
]
NUH88_03895 (recQ)
Enzymes [BR:
naci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NUH88_03895 (recQ)
Messenger RNA biogenesis [BR:
naci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NUH88_03895 (recQ)
DNA repair and recombination proteins [BR:
naci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NUH88_03895 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UUX50847
UniProt:
A0A9J7AU48
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All DBs
Position
815773..817626
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AA seq
617 aa
AA seq
DB search
MMHALRPDPESEKYRVLKGVFGFEQFRPGQEPVVDAILAGNNALAVMPTGSGKSLCFQLP
ALVRGGLTVVVSPLVALMQDQVAALKLAGVRAETINSAKDRADNVAIWRKVAAGEIDLLY
LSPERLMTDRMLAAISKLPLSLLVVDEAHCISQWGASFRPEYDDLARLRAVFPDVPIAAF
SATADQVTRLDIAEKLFAGKAEIFVHGFDRPNIRLDVALRADWKKQVLDFLESHAGESGV
VYCLSRKKTEEISGFLREKGYNALPYHAGMEKEQRDRNQDLFMSESAVIMAATIAFGMGI
DKPDVRFVLHTDMPGSVEAYYQEFGRAGRDGEPAHALMLYGLDDIRMRRMFIDQEHEEGD
RRRREHKRLDALIAYCEAAECRRQSLLRYFGEESEPCGNCDACLEPAELTDGTSDAQLAL
KTIQETGERFGTVHIVDVLRGGNTERIRKFGHEKVSTYGAGTAHGAKDWQSLIRQLVAGG
FLDLDIQGFGGLSVSDKGKALLRGEASFRYRQDSLRRERKAKTARSASAPTESMSGPELR
LFKALKQLRSEIAREGNVPAYVVFTDRSLADMAAKRPTCKESFASIHGVGQAKLEKFAAP
FIDLILEQTGDEAASGG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgccctccgcccggatccggaaagcgagaagtatcgcgttctgaagggcgtt
ttcgggttcgagcagttccggccgggacaggaaccggtggtcgacgcgatcctcgccggc
aacaacgcgctggcggtgatgccgaccggctccggcaagtccctctgcttccagctcccc
gcccttgtacgtggcggcctgaccgtcgtggtctcaccgctggtggcattgatgcaggac
caggtggctgcgctgaagctcgccggggtccgtgccgagacgatcaattcggcgaaggac
cgggcggacaatgtcgcgatctggcgcaaggtcgcggccggcgagatcgacctgctctat
ctctcgcccgagcggctgatgacggaccgcatgctggcggcgatctccaagctgccgctc
tcgctgctggtggtcgacgaggcgcactgcatttcgcaatggggcgcctcgttccgcccg
gaatatgacgacctcgcccgcctgcgagcggttttcccggacgtgcccatcgccgccttc
tcggcgacggcggatcaggtcacccgcctcgacatcgcggaaaagctcttcgccggcaag
gcggagatcttcgtgcacggcttcgatcgcccgaatatccgtctcgacgtcgcgctccgc
gccgactggaagaagcaggtgctcgatttcctcgagtctcacgccggcgagagcggcgtc
gtctattgcctctcgcgcaagaagaccgaggaaatctcaggcttcctgcgcgagaaaggc
tacaacgcgctgccctaccacgccgggatggagaaggagcagcgcgaccgcaaccaggac
ctcttcatgtccgagagtgcggtcatcatggccgccaccatcgccttcggcatggggatc
gacaagccggatgtccgcttcgtgctgcataccgacatgccgggaagcgtcgaggcctat
taccaggaattcggccgcgccggccgcgacggcgagcccgcccacgcactcatgctctac
gggctcgacgatatccgcatgcgccggatgttcatcgaccaggagcatgaggaaggcgac
cggcggcggcgcgagcacaaacggctcgacgcgctgatcgcctattgcgaggcggcggag
tgccggcgccagtcgctgctgcgctatttcggcgaggagtcggagccctgcggcaattgc
gacgcctgcctggagcccgccgagctgaccgacggcacgagcgacgcgcagctcgccctg
aagaccatccaggaaaccggggagcgtttcggcaccgtgcatatcgtcgacgtgctgcgc
ggcggcaataccgagcggatccgcaagttcgggcacgagaaagtctcgacctacggggcc
ggtacggcgcacggcgccaaggactggcaatcgctgatccgccagcttgtcgccggcggc
ttcctcgatctcgacatccagggcttcggcggactctccgtcagcgacaaaggcaaggcc
ctgctgcgcggcgaggcctccttccgctaccgccaggacagcctcagacgcgagcgcaag
gcaaagaccgcccgctccgcctccgcgccgacagagtcgatgagcggaccggaacttcgc
cttttcaaggctctgaaacagctccgctcggaaatcgcacgcgaaggcaacgtgcccgcc
tatgtcgtctttaccgaccgcagcctcgccgacatggccgccaagcgcccgacctgcaag
gagagcttcgcctccatccacggcgtcggccaggcgaagctggagaaattcgcggcgccg
ttcattgacctgattctggaacagaccggagacgaggccgccagcggaggctga
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