Nisaea acidiphila: NUH88_04405
Help
Entry
NUH88_04405 CDS
T08369
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
naci
Nisaea acidiphila
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naci03016
]
NUH88_04405 (rnd)
Enzymes [BR:
naci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NUH88_04405 (rnd)
Transfer RNA biogenesis [BR:
naci03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NUH88_04405 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UUX50935
UniProt:
A0A9J7AUD2
LinkDB
All DBs
Position
939542..940690
Genome browser
AA seq
382 aa
AA seq
DB search
MTIITDTEALAAVCAEFATEDFVTIDTEFMREKTYYPQLCLVQIGNDEKAVAIDTLADGI
DLAPLVELLKNRDVLKVFHAARQDLEIFYHLCGELPAPVFDTQIAAMVCGFGDQVSYDKL
VQSLTGTRLDKSSRFADWSHRPLGERQLGYALADVTHLRKVYRKLVERIEKTGRQDWIED
EVAKMADPALYDPDPDTSWQRLKVRSGKPKFLAVLQQVAAFREREARQRDVPRNRILRDD
VLMDLAAHAPTTPEDLARTRTFNAQSANGRLGKEIIKVVEKGLAIPPEECPILPVKEDKR
EAPGPIVELLKVLLKIRSDEEKVAARLIANASEIEAIALDDDADVPALKGWRREIFGGDA
INLKHGRIGLTADDGKIKLMRL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcatcaccgataccgaagcacttgccgctgtctgcgccgagttcgccaccgag
gacttcgtgaccatcgacacggagttcatgcgcgagaaaacctattacccgcagctctgt
ctggttcagatcggcaatgacgagaaagcggttgcaatcgacactctggccgacgggatc
gacctggcgcctctcgtcgagcttcttaagaatcgcgatgtcctcaaggtcttccacgct
gcgcgtcaagatcttgaaatattctatcacctctgcggcgaactgccggcaccggtcttc
gacacccagatcgctgcaatggtttgcggcttcggcgaccaggtttcctacgacaagctg
gttcagagcctgaccggcacccggctggacaagagctcccggttcgccgactggtcacat
cggccgctcggcgagaggcagcttggctatgcgctcgccgacgtgacccacctgcgcaag
gtttatcgcaagctggtcgaaagaatcgagaagaccggccgtcaggactggatcgaggac
gaggtcgccaaaatggccgacccggcgctctatgacccggatccggatacctcctggcag
cgcctgaaagtgcgaagcggcaagcccaagttccttgctgtgctgcaacaggtcgcggcg
tttcgcgagcgggaagcgcgccagcgcgatgtcccgcgcaatcgtatcctgcgcgacgat
gtcctgatggatctcgccgcgcatgcgccgaccacgccggaagacctcgcccgcacccgg
accttcaatgcacagagcgcgaacggacggctcggcaaggaaatcatcaaggtggtcgag
aaaggcctcgcgatcccaccggaagagtgcccgatcctccccgtgaaggaagacaagcgt
gaggcgcccggaccgatcgtcgagttactgaaggtgctactcaagatccgctcggacgag
gaaaaggtcgccgcccgcctgatcgccaacgcctcggagatcgaagcgatcgcgctggac
gacgacgccgacgtgcccgcgctgaaaggctggcgccgggaaatcttcggtggcgacgcg
atcaatctgaagcatgggcgcatcggcctcaccgccgacgacggcaaaatcaagctgatg
cggctttga
DBGET
integrated database retrieval system
