Nisaea acidiphila: NUH88_06715
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Entry
NUH88_06715 CDS
T08369
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
naci
Nisaea acidiphila
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naci03400
]
NUH88_06715 (addB)
Enzymes [BR:
naci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NUH88_06715 (addB)
DNA repair and recombination proteins [BR:
naci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NUH88_06715 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UUX51381
UniProt:
A0A9J7B123
LinkDB
All DBs
Position
complement(1456803..1459799)
Genome browser
AA seq
998 aa
AA seq
DB search
MGIGGLYAIAATDGFADTLAKGLWEEAGEDPMVLARMSVLLPTRRAVRTLRESFLRLGNG
RPMLLPAMRPVGDIDDEEGTFGGLDGAVAAGDLPPAVPGLRRQLLLTQLVQRFLERKDSG
SAIHAAGVDHAALLAGELARFLDQVHTEQVRYEGLAGLARERYAAHWQEVLEFLSIATEF
WPAMLAEEGAMEAPLRHAALVDRLAALWAGSPPEDPVIVAGSTGSIPATARLMGAVLGLP
RGSVVLPGLDRDADAATWSAIEGDSGHAQHNLALLLQRLGKRREEVQIWPVAAERKTHSA
RARLIQEVLRPAETTEAWRRLAETDQELLSSGTEGLSVLSCPSHHEEAETIALMLREALE
DQTRTAALVTPDRVLARRVKAALRRWEVEVDDSAGQPLAATLPMTFWLATADMAVEACAP
VPLLAALKHPLAAGGMAQPRFRRRVRTLEREVLRGPRPAPGPGGLLAALDEAFADEDRDD
MRAWIDRLAEPISFFSGLLRSDEISLIDLLSAHNAVAEALAATDEESGDKRLWAGEAGED
AANFLAELAESARDFPPLDGRDYLSLLEALLVGRVHRPRYGTHPRLAILGPLEGRLQQYD
LMILGGLNEGTWPPDPGADPWMSRPMRAEFGLPAPERRIGLSAHDFQMAASAPEVVLTRA
ERVEGAPTVASRWWLRMETVLRALQLTEKVRCPLADYPHWQQELDRPAKLDPVKPPTPRP
PIDARPRRFSVTEIETWVRDPYAIYAKRVLGLRSLDPLDADPGAADRGTMIHRALELFTN
EFPKDIPPGALERLIEIGRGEFAREIAHPSVQAFWWPRFERIAEWFVETERVRRSGIAAI
WTEKKGHVTVRGLKDPVDLNCEADRIERLADGGYAIVDFKTGAPPTESQVTAGYSPQLPL
EALILSMGGFEGLPEGAVDALEYWRLSGGDPAGERKAIKAAIETLVTEAEEGLLNLIRTF
DDPETPYRSRPAPEYAPRYSDYEHLARVKEWSAGGELS
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggggatcggcgggctctatgccatcgcggcgacggacgggtttgccgatacgctggcg
aagggcctctgggaggaggccggcgaggacccgatggtactcgctcgcatgtcggtcctg
ctgccgacccgccgtgcagtccggaccttgcgagagagcttcctccggctcggtaacggc
cgccccatgctgctgccggcgatgcgccccgtcggcgatatcgacgatgaagagggcact
ttcggcgggctcgacggcgccgttgccgcgggcgacctgccgcccgccgttcccggcctc
cgccgacagcttctcctgacccagctcgtccagcgcttcctcgaacgcaaggacagcggc
tctgcgatccatgccgccggagtggatcatgcggcgctgctcgcgggcgaactcgcgcgc
tttctcgatcaggtccataccgaacaagtcaggtacgaggggctcgccgggctcgcgcgc
gaacgctatgcggcgcactggcaggaggttttggaattcctctccatcgcgaccgagttc
tggccggcgatgctggcggaggagggggcgatggaagcgccgctccgccatgcggcgctg
gtcgaccggctcgccgcgctctgggctgggagcccgcctgaagacccggtgatcgtcgcc
ggttcgaccggcagtatcccggcgacggcgcgcctgatgggcgcggtgctcgggctgccg
cgcggctcggttgttctgcccggcctcgaccgggacgccgacgcggcgacctggagcgcg
atcgagggcgacagcggccacgcccagcacaatctcgccctcctgctgcagcgtctcggc
aagagacgcgaggaagtgcaaatctggccggtcgccgctgaacggaagacccattccgca
cgggcgcggctgatccaggaagttctgcggcccgccgagacaacggaagcctggcgacgc
ctcgccgagacggaccaggaactgctctccagcggcaccgaggggctctccgtgctgagc
tgcccgagccaccacgaagaggcggagaccatcgcgctgatgttgcgcgaggcgttggag
gaccagacccgcaccgccgcgctggtgacgcccgaccgggtactcgcccgccgggtgaag
gcagcgctccggcgctgggaagtcgaggtcgacgattccgcggggcagccgctggccgcc
accctgccgatgaccttctggctggcgacggcggacatggcggtggaagcctgcgcgccg
gtgccgctgctcgccgccctgaaacacccgcttgccgccggcggcatggcgcagccgcgt
tttcgccgcagggtgcgtacgctcgaacgcgaagtgctgcgcggcccgcgcccggcgccg
ggaccgggaggcctgctggcggctttggacgaagccttcgctgatgaagatcgcgacgac
atgcgcgcctggatcgatcgtctcgccgaaccgatctcgtttttctccggcctgctgcgg
agcgatgagatctcgctgatcgacctgctctccgcccacaacgcggtcgccgaggcgctg
gcggcgacggacgaggagagcggcgacaagcggctctgggccggagaggcgggcgaggat
gcggcgaacttcctcgccgagcttgctgagtcggcccgtgatttcccgccgctggacgga
cgcgactatctctcgctgctggaggcgctgctggtcggccgcgtgcaccggccgcgctac
ggcacccatccgcgtcttgccattctcggtccgctggaaggccggttgcagcaatacgat
ctgatgatcctcggcggcttgaacgaaggcacctggccgccggaccccggcgccgacccc
tggatgagccggccgatgcgcgcggaattcggcctccccgcgccggagcgccgcatcggc
ctctcggcgcacgatttccagatggccgcgtccgcgccggaggtcgtcctgacacgggcg
gagcgggtcgagggcgctccgacggtcgcctcgcgctggtggctccgcatggagaccgtg
ctgcgcgcgctgcagctgaccgagaaggtgcgctgcccgttggcggactatccgcattgg
cagcaggagctggacagaccggcgaaactcgacccggtaaaaccaccgaccccgcgccct
ccaattgacgcccgtccgcgccgcttctccgtcaccgagatcgagacctgggtgcgcgat
ccctatgcgatctacgccaagcgggtcctcgggctgcgctcgctcgacccgctcgacgcc
gatccgggcgcggcggaccggggcacgatgatccaccgggcgctggaactcttcaccaac
gagttcccgaaggatattccgccgggcgcattggagcgcctgatcgagatcgggcggggg
gagttcgcacgggagatcgcgcatccctcggtgcaggccttctggtggccgcgtttcgag
cgcatcgccgagtggttcgtcgagacggagcgcgtccgccggtccggcatcgccgcgatc
tggacggagaagaagggccacgtcaccgtgcgaggtctgaaggatccggtggatctcaat
tgcgaggcggaccgcatcgaaaggctggccgacggcggctacgcgatcgtggatttcaag
accggtgcaccaccgacggaaagccaggtgacggccggatactccccgcagctcccgctg
gaagcgctgatcctctccatgggcggtttcgaggggctgccagaaggtgcggtcgacgcg
ctcgagtactggcgtctcagcggcggcgatccggcgggcgagcgcaaggcgatcaaggcg
gcgatcgagacgcttgtgaccgaggccgaggaagggttgctcaacctgatccggaccttc
gacgatccggaaacgccctaccgctcgcgtccggcgccggaatatgcgccgcgttattcc
gactacgagcatctggcgcgggtgaaggaatggtccgccggcggggagctgtcctga
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