Nisaea acidiphila: NUH88_10935
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Entry
NUH88_10935 CDS
T08369
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
naci
Nisaea acidiphila
Pathway
naci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NUH88_10935 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naci03021
]
NUH88_10935 (rho)
03019 Messenger RNA biogenesis [BR:
naci03019
]
NUH88_10935 (rho)
Transcription machinery [BR:
naci03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NUH88_10935 (rho)
Messenger RNA biogenesis [BR:
naci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NUH88_10935 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
ResIII
Fungal_virus_P2_C
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UUX47935
UniProt:
A0A9J7AL91
LinkDB
All DBs
Position
2374225..2375487
Genome browser
AA seq
420 aa
AA seq
DB search
MHLQELKSKSPQDLLAYAEELEIENASVLRKQDMMFAILKQLADNDLPIYGTGVLETLPD
GFGFLRSPESNYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRAPKDGERYFALLKVNKIN
FEDPDAVRHRINFDNLTPLYPEQRLNLELEKAENKQQDVTTRVIDLISPLGMGQRGLIVA
PPRTGKTVMLQNIAHAIAENHPDAYLLVLLIDERPEEVTDMDRSVKGEVISSTFDEPAAR
HVQVAEMVIEKAKRLVEHKRDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPK
RFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKLADKRTFPAI
DITRSGTRKEELLVDRATLNKMWVLRRILTQMGTVDAMEFLLDKLKVSKNNNDFFDAMNS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcaagaattgaaatcaaagtcaccccaagatcttcttgcttatgcggaagaa
ttggagatcgagaacgcaagtgttctgcgcaagcaggacatgatgtttgctattctcaag
cagttggccgacaacgatcttcccatctatggcacaggagttctcgaaactctgccggac
gggttcggtttcctacgatcccctgaatcgaattacctgccgggtccggacgacatttat
gtctctcccagccaggtgcgccgcttcggtctgcgcaccggtgatacggtcgagggacag
atccgggcaccgaaggatggcgagcggtacttcgcgctgctcaaggtcaacaagatcaat
ttcgaggacccggatgcggttcgccaccggatcaatttcgacaatctgacaccgctctat
cccgagcagcgtctgaatctcgaacttgagaaggcggagaacaagcagcaggacgtgacc
acgcgggtgatcgacctgatctcgccgcttggcatgggtcagcgcggtctgatcgtggcg
ccgccgcggaccggtaagacggtcatgctgcagaacatcgcccatgcgatcgccgagaac
catccggacgcctaccttctcgtgctcctgatcgacgagcgcccggaggaagtgacggat
atggaccggtccgtgaagggggaggttatcagctccaccttcgacgagccggccgcgcgt
cacgtccaggtcgccgagatggtgatcgagaaggccaagcgcctcgtggagcacaagcgc
gacgtgatcatcctgctggactcgatcacgcgtctcgcgcgcgcctacaacaccgttgtt
ccgtcctcgggcaaggtgctgaccggcggtgtcgacgcgaacgcgctgcagcgcccgaag
cgcttcttcggcgcggcccggaacatcgaggagggcggctcgctgaccatcatcgcgacc
gcgctgatcgataccggatcccgcatggacgaagtcatcttcgaagagttcaagggcacc
ggtaactccgagatcattctcgaccgcaagctcgccgacaagcggaccttcccggccatc
gacatcacccggtcgggtacccgcaaggaagagctcctggtggatcgtgcgaccctcaac
aagatgtgggtcctgcgccgcatcctgacgcaaatgggcaccgtcgacgcgatggagttc
ctgctcgacaagctgaaggtctcgaagaacaacaacgatttcttcgacgcgatgaattcc
tga
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