Nisaea acidiphila: NUH88_12500
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Entry
NUH88_12500 CDS
T08369
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
naci
Nisaea acidiphila
Pathway
naci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NUH88_12500 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naci03400
]
NUH88_12500 (xseA)
Enzymes [BR:
naci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NUH88_12500 (xseA)
DNA repair and recombination proteins [BR:
naci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NUH88_12500 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Apolipoprotein
Gly_transporter
ExoU_mid_dom
MbeD_MobD
Motif
Other DBs
NCBI-ProteinID:
UUX48235
UniProt:
A0A9J7AKQ6
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All DBs
Position
2692129..2693712
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AA seq
527 aa
AA seq
DB search
MQDDSPPPSGNIPEFSVSEISFQVKRTVEGAFEHVRVRGEVSRPTRAGSGHVYLTLKDEK
SVLDAVCWRGTAQRLSVQPEEGMEVICTGKLTTFPGRSKYQMVIEQMELAGEGALLKLLE
ERKKKLAAEGLFADERKRPLPFLPKVIGVVTSPTGAVIRDILHRLSDRFPTHVLVWPVLV
QGEAAKDQVAAAIEGFNAIAPGGPVPRPDLLIVARGGGSLEDLWAFNEEIVVRAAAASEI
PLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELLATLMQDESRLFNGLQRKLG
EAETRLTGLARGLGDPRSIIEAKAQTVDYRWQTASAATDRMLSRLSEQVRDLAAQIPEPA
AELGRLENRFVTARQKLDSVLDSFRQTAASDLRAASVRLRLEPVADRMTRGARDAGRAWV
QIERAVDRILVQQNDRLTSVGRILESNSYEQTLKRGFALVRDADGAPVTRAASLSEGDGV
SIHFGDGSRDAVIGAGSPDGPEAKPSPPKQTAKPKAGKTDPAQGSLL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgatagcccgccgccttccggcaatatccccgaattctcggtcagcgagatc
tccttccaggtcaaacggaccgtcgaaggcgctttcgaacatgtgcgcgtgcgcggcgag
gtttcccgtccgacccgggccggatccggccatgtctatctcacgctgaaggacgagaag
tcggtgctcgacgcggtctgctggcgcggcacggcgcagcgcctctcggtgcagccggaa
gaaggcatggaggtgatctgcaccggcaagctgacgaccttcccggggcgctccaagtat
cagatggtgatcgagcagatggaactcgccggcgagggcgcgcttctgaagctcctggag
gagcgcaagaagaagctcgccgccgagggcctcttcgccgatgagcgcaagcgtccgctg
ccgttcctgccgaaggtgatcggcgtcgtcacttcgccgaccggtgcggtgattcgagac
attctgcaccggctctcggaccgtttcccgacccatgtgctggtctggccggtgctggtc
cagggagaggcggccaaggaccaggtcgcggccgcgatcgaaggcttcaacgcgatcgcg
ccgggcggaccggtgccgcgtccggacctgttgatcgtggcgcgcggcggcggcagtctc
gaggatctctgggccttcaacgaggaaatcgtggtgcgtgcggcggcggcgagcgagatc
ccgctgatctccgccgtcgggcacgagaccgacaccacgctgatcgatttcgcctccgac
cggcgggcgccgacaccgacggccgcggccgagatggcggtgccggtgcgcgcggagctg
ctcgccacgctgatgcaggacgagtcccgtctcttcaacgggcttcagcgtaagctcggc
gaggcggagacaaggctgacaggtcttgcgcgcgggctcggcgatccccggtcgatcatc
gaggcgaaggcgcagacggtggactatcgttggcagacggcaagtgcagcgaccgatcgc
atgctttcgcgtctttccgaacaggtacgcgatctcgctgcgcagatcccggagccggcg
gcggaactcggaaggctcgaaaaccgtttcgtcaccgcgcgacagaaactggactctgtg
ctcgacagtttccgtcagacggcggcaagcgatctccgtgcggcctccgtgcgcctcagg
ctggagccggtcgcagaccgcatgacgcgcggcgcacgcgatgcggggcgggcctgggtg
cagatcgaacgcgcggtggaccgcattctcgtgcagcagaacgaccggctgacctcggtc
ggccgtattctggagagcaattcctacgagcagactctgaagcgcggctttgcgctggtg
cgcgacgcggacggcgcgccggtgacccgcgcggcgtccctctccgaaggcgacggggtc
tcgatccatttcggcgacggcagccgagatgcggttatcggcgccggttcgccggatggg
cccgaggcgaaaccgtcgccgccaaaacagacggcgaaaccgaaggccggtaagaccgat
ccggcgcaggggagcctgctgtga
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