Nisaea acidiphila: NUH88_16920
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Entry
NUH88_16920 CDS
T08369
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
naci
Nisaea acidiphila
Pathway
naci03420
Nucleotide excision repair
naci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NUH88_16920
03430 Mismatch repair
NUH88_16920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naci03400
]
NUH88_16920
Enzymes [BR:
naci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NUH88_16920
DNA repair and recombination proteins [BR:
naci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NUH88_16920
MMR (mismatch excision repair)
Other MMR factors
NUH88_16920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UUX49075
UniProt:
A0A9J7AN58
LinkDB
All DBs
Position
3625996..3628305
Genome browser
AA seq
769 aa
AA seq
DB search
MTDLFFESEPEKPANGGGDNQPYFDGLNERQGEAVRTLDGPLLVLAGAGTGKTRVLTTRL
AHLISTGTARPWNVLAVTFTNKAAREMRERVAAVIGPMAEQVWLGTFHALGARILRRHAE
LVDLRPDFTILDTDDQQRLLKQILQAENIDDKKWPARAMMGVIQRWKDRGLTPDKVGRGD
AGDLAGGRLVEIYRQYQERLKILNAVDFGDLLLLTVNLFQSHPDVLTKYHDQFTHILVDE
YQDTNVVQYLWLRLLAQKSRNICCVGDDDQSIYGWRGAEVGNILKFEKDFPGAQIIRLEQ
NYRSTSRILAAASGLIAHNEGRLGKTLWTDGADGEKLEIRGLWDGESEARHVGDEIESLQ
RKGAKLSEIAVLVRAGFQTREFEERFLTIGLPYRVVGGARFYERMETRDALAYLRVVNQR
DDDLAFERIVNKPKRGIGDATMQSVHYLARNEGISLYRAAARIVETDELKPAAKRKLAEV
VENFERWRSLVEVEDHSDLARIILDESGYTEMWQRDKSPEAPGRLENLKELCGAMEEFEN
LAGFLEHISLVMENAESADQEQVSIMTLHAAKGLEFNDVFLPGWEDGMFPNQRALDESGA
AGLEEERRLAYVGLTRARKAVHISFAANRRVHGMWQSAVPSRFIEELPDEHIELSSETGF
QGSRYGGFGAQSGDADLWGDGGFGYGSAQSGRGPGYGRRRGESRAGPPLLEGKGYVVDRS
SPPGFEVGERVFHQKFGMGTVSSVDGDKLQIAFDKAGSKKLVASFVSKP
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacagatctgttttttgaaagtgaacccgaaaaacccgccaacggcggtggcgacaac
cagccgtatttcgacgggttgaacgagcgccagggggaggccgtccgaaccctggacggg
ccactgttggtgctggcgggggcggggaccggaaagactcgagtcctgacgacacgcctc
gcgcatctgatctcgaccgggacggcacgcccctggaatgtgctcgcggtgaccttcacc
aacaaggcggcacgtgagatgcgtgagcgggtcgcggccgtcatcgggccgatggcggaa
caggtctggctcgggacctttcacgctctcggggcaaggattctcaggcgtcacgcggaa
ctggtcgacctcaggccggacttcaccatcctcgataccgacgaccagcaaaggttgtta
aagcagattctccaggccgagaacattgacgacaagaagtggccggcgcgggccatgatg
ggagtgatccagcgttggaaagaccgtgggctgacgcccgacaaggtcggacggggcgac
gccggagatcttgccggcggacgcctggttgagatctaccggcagtaccaggagcggctc
aagatcctgaacgcggttgatttcggagatcttcttctgctgaccgtgaacctgtttcag
agccatccggacgtactcacgaagtatcacgatcagtttacccacattctggttgatgaa
tatcaggacaccaacgtcgtccaatatctctggctcaggctgctcgcgcagaagagccgg
aacatctgctgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgccgaggtc
ggtaacatcctgaaattcgagaaggatttccccggggcgcagatcatccggctggagcag
aactatcgctccacttcgcgaatcctcgctgcggcgtccggcctgatcgcccataatgag
ggacggctcggaaagacgctctggaccgatggtgcggacggcgaaaagctggagattcgc
gggctctgggatggcgaatcggaagcgcgtcatgtcggcgacgagatcgagtctctgcag
cgcaagggcgcgaaactctcggagatcgcggtgcttgtgcgcgccggtttccagacacgc
gagttcgaagagcgcttcctgaccatcgggctgccttaccgggtggtcggtggggcgcgc
ttctacgagcgcatggagacccgcgacgcgttggcatatctgcgggtggtgaaccagcgg
gacgacgatctcgctttcgagcggatcgtcaacaagccgaaacgcgggatcggcgatgcc
acgatgcaatcggtgcattatctcgcgcggaacgagggcatatcgctctatcgcgccgcc
gcgcggatcgtcgagacggacgaactgaagccggccgccaaacgaaagctggccgaggta
gtcgagaatttcgagcgctggcgatccctggtcgaggttgaggatcacagcgacctcgct
cggatcatcctcgacgaatccggctataccgagatgtggcagcgggacaaatcgccggaa
gcaccgggcaggcttgagaacctgaaagagctttgcggtgcgatggaagagttcgagaat
ctcgccgggttcctcgagcatatcagcctcgtgatggaaaacgccgagagcgcggaccag
gagcaggtcagcatcatgaccctgcatgcggccaaggggctcgaattcaacgatgtgttc
ctgcccggctgggaggacggcatgtttccgaaccagcgggcgctcgacgagagcggtgcg
gcggggctggaggaggagcggcggctcgcctatgtcggcctgacacgggcgcgcaaggcg
gtccatatcagcttcgcggccaatcgccgggtccatggcatgtggcagagcgcggtgccg
tcccgcttcatcgaggaactgccggacgagcatatcgagctctccagcgaaaccggtttc
cagggttcgcgctatggcggtttcggagcgcagtccggggatgcggatctctggggcgac
ggtggctttggctacggttcggctcagtccggccgggggccgggttacggcaggcgccgg
ggcgaaagccgggccgggccgcctttgctggaaggcaaaggctatgtcgttgatcgctcc
tcgccccccggattcgaagtcggcgagcgggtgttccatcagaagttcgggatgggaacc
gtgtcgagcgtcgacggggataaactgcagatcgccttcgacaaggcaggcagcaagaag
ctcgtcgcaagttttgtgagtaagccatga
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integrated database retrieval system
