Nisaea acidiphila: NUH88_17155
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Entry
NUH88_17155 CDS
T08369
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
naci
Nisaea acidiphila
Pathway
naci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NUH88_17155 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naci03400
]
NUH88_17155 (uvrB)
DNA repair and recombination proteins [BR:
naci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NUH88_17155 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NUH88_17155 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
P-loop_SecA
TrwB_AAD_bind
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
UUX49119
UniProt:
A0A9J7API0
LinkDB
All DBs
Position
complement(3674563..3676749)
Genome browser
AA seq
728 aa
AA seq
DB search
MSTQLEDAPAAPLVGALKPDLKSDAAPQDRGRPFEISSDFAPAGDQPAAIKDLVGGIEAE
EMDQVLLGVTGSGKTFTMAHVIQQVRRPALVLAPNKTLAAQLYGEMKSFFPNNAVEYFVS
YYDYYQPEAYVPRTDTYVEKEASINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGAV
ETYGKMTVNVKAGATIDQTRLMRQLVELQYRRNDASFHRGTFRVRGDSIEIFPAHLEDRA
WRLSLFGDEVDQIHEFDPLTGQKTTSLEQIRIFANSHYVTPKPTLTQAVKAIKQELKLRL
DEMNKAGKLLEAQRLEQRTVLDMEMMEATGSCAGIENYSRYLSGRNPGEPPPTLFEYLPE
NALLIVDESHVTVPQIGAMYKGDFARKSTLSEFGFRLPSCMDNRPLKFEEWEDMRPQTVF
VSATPGPWELDRTGGVFIEQVVRPTGLTDPECIIRPTETQVDDVIAECKECAALGQRVLI
TTLTKKMAEALTEYMHEAGIKVRYIHSDVDTLERIEIIRDLRLGVFDVLIGINLLREGLD
IPECALVAILDADKEGYLRSRTSLVQTIGRAARNVEGRVLLYADKMTDSLKYAIDETNRR
RARQEEYNKAHGITPESVKKSIGDILESVYERGDHVTVETGSDEGELVGKDIKQVISELE
AAMRTAAADLEFEEAARLRDEIKRLEAADLGMTLEGKPLPKGAVVRIKGPVQPPKGKPPK
RTSGKRRK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaactcgaagacgcccccgccgctccgctcgtcggcgcgctgaagcccgac
ctgaaatccgacgcggcgccgcaggatcgcgggcggccgttcgagatttcgtccgacttc
gcgccggcgggcgaccagccggcggcgatcaaggatctggtcggcgggatcgaggccgag
gagatggaccaggtgctgctcggggtcaccggctcgggcaagaccttcaccatggcgcac
gtgatccagcaggtccggcgccccgccctcgtgctggcgccgaacaagacgctggcggcg
cagctctacggcgagatgaagagcttcttcccaaacaacgcggtcgagtatttcgtctcc
tattacgactattaccagccggaggcctacgtcccgcgcaccgatacctatgtcgagaag
gaagcctcgatcaacgagcagatcgaccggatgcggcactcggcgacgcgcgcgctgctg
gagcgcgacgacgtcatcatcgtcgcctcggtctcctgcatctacggtatcggcgcggtc
gagacctacggcaagatgacggtcaacgtaaaggccggcgcgaccatcgaccagaccagg
ctgatgcgccagctggtcgagctgcagtaccggcgcaacgacgcgagcttccaccgcggc
accttccgggtgcgcggagattcgatcgagatcttcccggcccacctcgaggaccgcgcc
tggcggctctcgctgttcggcgacgaggtcgaccagatccacgaattcgacccgctgacc
gggcagaagacgacgagcctcgagcagatccggatcttcgccaacagccactatgtgacg
ccgaagccgacgctgacccaggcggtgaaggcgatcaagcaggagctgaagctccggctc
gacgagatgaacaaggcgggcaagctgctggaggcgcagcgcctcgaacagcgcaccgtg
ctcgacatggagatgatggaggcgaccggctcctgcgccgggatcgagaactattcgcgc
tatctctccgggcgcaatccgggcgagccgccgccgactctgttcgagtacctgccggag
aacgcgctgctgatcgtcgacgaaagccacgtcacggtgccgcagatcggcgccatgtac
aaaggcgactttgcgcggaaatcgacgctctcggaattcggcttccgcctgccctcctgc
atggacaaccggccgctcaagttcgaggaatgggaggacatgcgcccgcagacggtcttc
gtctcggccacccccggcccctgggagctcgatcgcaccggcggcgtcttcatcgagcag
gtggtgcgcccgaccggcctgaccgaccccgaatgcatcatccgcccgaccgagacccag
gtcgacgacgtgatcgcggagtgcaaggagtgcgcggcgctcggccagcgggtgctgatc
accacgctcaccaagaagatggccgaggcgctgaccgaatacatgcacgaggccggcatc
aaggtgcgctacatccactcggacgtggacacgctggagcggatcgagatcatccgcgac
ctccggctcggcgtgttcgacgtcctgatcggcatcaacctgctgcgcgaggggctcgac
atcccggaatgcgcgctggtcgcgatcctggatgccgacaaggagggctatctgcgctcc
cggacctcgctggtgcagaccatcggccgcgcggcgcggaacgtcgaggggcgggtcctg
ctctatgccgacaagatgaccgacagcctcaaatacgcgatcgacgagaccaaccggcgg
cgggcgcggcaggaggaatacaacaaggcgcacggcatcacgccggagagcgtcaagaag
tcgatcggcgatattctcgaaagcgtctacgagcgcggcgaccatgtcacggtcgagacc
ggctccgacgagggcgaactggtcggcaaggacattaagcaggtgatctccgagctggaa
gccgcgatgcggaccgccgccgccgatctcgaattcgaggaggcggcacggctgcgcgac
gagatcaagcggctggaggcggccgatctcggcatgacgctggaaggcaagccgctgccg
aagggcgcggtcgtgcggatcaaggggccggtgcagccgccaaagggcaaaccgccgaaa
cgaaccagcggcaaacgccggaaataa
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