Nisaea acidiphila: NUH88_20470
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Entry
NUH88_20470 CDS
T08369
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
naci
Nisaea acidiphila
Brite
KEGG Orthology (KO) [BR:
naci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naci03400
]
NUH88_20470
Enzymes [BR:
naci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NUH88_20470
DNA repair and recombination proteins [BR:
naci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NUH88_20470
Prokaryotic type
NUH88_20470
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UUX49758
UniProt:
A0A9J7ARC5
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Position
complement(4378954..4380411)
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AA seq
485 aa
AA seq
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MSDKPILLWFRQDLRLSDNPALTAAVASGARVLPVYVLDDKTPGHWAPGGAARWWLHHSL
ASLGRDLEQCGNRLHLVSSDNAAETIRELAKSTGAAAVYWNRCYEPFAIERDTELKSALK
ADGIEAESFNASLLFEPWEVKTKSGTPPKVFSPYWRALRALGEPEAPEPAPERVAPLKAA
PASEKLEDWDLLPTKPDWAVGFHDHWTPGETSAQVRLDRFLETALDDYKEGRNFPAKPNV
SRLSPHLHFGEIGPRQVWHRTVAHCHAADRNPFAGSAEHFLKELVWREFSYSLLYHNPDL
PEACLRPEFENFPWDSSEKPLSAWQRGKTGIPIVDAGMRELWQTGYMHNRVRMICASFLI
KHLMVDWRAGEAWFWDTLLDADLASNSASWQWVAGSGADAAPYFRIFNPVLQGEKFDPDG
TYTRRWVPELADVPDRYLQKPWEAPGNPAPDYPAPIVDLAEGRERALAAYQDLGEAEPAK
AAACG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaaaccgatccttctctggttccgccaggatctccgtctcagcgacaatccg
gcgctgacggctgccgtcgcgtcgggcgcacgggtgcttcccgtttatgttctggatgac
aagacacccgggcactgggcgccgggaggcgcggcgcggtggtggctgcaccacagcctc
gcttctcttggcagagaccttgaacaatgcggaaacagattgcatctcgtgagctccgac
aacgccgccgagacgatccgcgagcttgcaaagagcaccggcgcggccgcggtttactgg
aaccgctgttacgagccgttcgcgatcgagcgcgacacggagctgaaatccgcgctcaag
gcggacgggattgaggccgaaagcttcaacgcctccctgctgttcgagccgtgggaagta
aagaccaagtccggtacgccgccgaaagtcttctccccctactggcgtgcgctccgggca
cttggcgagccggaagcgccggaaccggcccccgaacgggttgccccgctgaaggccgcg
cccgcatccgaaaagctcgaagattgggacctgctgccgacaaaacctgactgggccgtg
ggattccacgatcactggacgccgggcgagaccagcgcgcaggtccggctcgaccggttc
ctcgaaaccgcgctagacgattacaaggaaggccggaactttccggcgaaacccaatgtc
tcgcgtctatcgccgcatctgcatttcggagagatcggacctcgccaggtctggcacagg
accgtcgcgcattgtcatgccgcggaccgaaacccgttcgccgggtcggcggagcatttc
ctgaaggaactggtctggcgcgagttttcctattctctgctctatcacaaccctgacctt
ccggaagcctgcctcaggcccgaattcgagaactttccctgggacagctccgagaaaccg
ctatctgcctggcagcgtggcaagaccggaattccgatcgtcgatgcagggatgcgcgaa
ctctggcagaccggttacatgcacaaccgcgtgcggatgatctgcgcctcctttctcatc
aagcatctgatggtggactggcgcgccggagaggcctggttctgggatacgctgctcgac
gccgatctcgccagcaactccgcctcctggcagtgggtcgccggatccggcgccgatgcc
gcgccctatttccggattttcaatccggtcctgcagggggagaagttcgatcccgacggc
acctacacgagacgctgggttcctgaactcgctgacgtacccgaccgttacctgcagaag
ccctgggaggcgcctggaaatcccgcgcccgactatccggcgccgatcgttgatctcgcc
gaaggtcgggagcgggcgcttgccgcctaccaggatctcggggaggcagagcccgcaaag
gcagcggcgtgcggttag
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