KEGG   Nisaea acidiphila: NUH88_20485
Entry
NUH88_20485       CDS       T08369                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
naci  Nisaea acidiphila
Brite
KEGG Orthology (KO) [BR:naci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:naci03400]
    NUH88_20485
Enzymes [BR:naci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NUH88_20485
    5.6.2.6  RNA 3'-5' helicase
     NUH88_20485
DNA repair and recombination proteins [BR:naci03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NUH88_20485
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: UUX52278
UniProt: A0A9J7AYX2
LinkDB
Position
complement(4381972..4384416)
AA seq 814 aa
MAALPDAFRDWFDAKGWQPHPHQLEMLQAARSGKHALLIAPTGGGKTLAGFLPSLIDLAD
APNDGLHTLYVSPLKALAVDIHRNLLLPIEEMDLPVTAETRTGDTPQAKKQRQRGAPPNV
LLTTPESLALLLSYTDAPKIFAGLRTVVIDELHALAPNKRGEQLALGLARLAKLAPDARR
VGLSATVAYPDSLEAYLSPTGRHGAGDVARVAGGGAVAAEVEIMIGRGHFPWSGHMGTYA
VEDIYEQICGAGTTLVFVNTRAQAEILFQALWRVNEQNLPIALHHGSLSAEQRRKVEAVM
ANGGLRAVVATSSLDLGIDWAAVDLVIQVGAPKGSSRLLQRIGRANHRLDQPSRAILIPA
NRFEVLECQAAIDAVKEMTLDGELPSGGSLDVLAQHILGTACSGPFHPNRLYEEIRTAAP
YTELSREDFDAVLRFVTDGGYALRTYDRFRRLRPTADGKWTVVNERVAHAYRMNVGTIVE
AVTLKVRMRRGRFLGEIEEYFVQGLTPGDTFLFAGKLLTFEGVRETVVEVSPGGGEEPEI
PAYMGGRLPFTTHLSQRVRAMLEDDRDWPMLPAPVEDWLRMQQWRSVMPKRDRLLVEIFP
RSGKFYLVAYCFAGRNAHQTLGMLLTKRMERAGLDPLGFVASDYVIGVWSLKEPRREDVE
ALFDQNMLGDDLEEWMADSTLLKRTFRNVAVIAGLIERKLPGHEKTGRQVTINADLIYDV
LRSHEPDHILLRATRADAARGLTDIRRLADFLVEVQGRIDVRPLDRVSPLAVPILLEIGK
EQVYGGAMDTLLEEAEAELVAEATGGDMQAQLPI
NT seq 2445 nt   +upstreamnt  +downstreamnt
atcgccgcacttccggacgcattccgcgactggtttgacgcgaaaggctggcagccgcac
ccgcatcaactcgaaatgttgcaggccgcgcggagcggcaagcacgctttgctcatcgcg
cccaccggaggcggcaagacgctggccggtttcctgccgagcctgatcgacctcgccgat
gctccaaatgacgggctgcacacgctctatgtctcgccgctgaaagccctcgcggtcgac
attcaccgcaacctcctcctgccgatcgaggagatggacctgcccgtgacggcggaaacg
cggacgggcgacacgccgcaggccaagaagcagcgccagcgcggcgccccgccgaacgtt
ctgctgaccaccccggaaagcctcgcgctgctgctctcctataccgatgcaccgaagatc
ttcgcggggctgcgcaccgtcgtcatcgacgagttgcacgcgctggcgcccaacaaacgt
ggcgaacagctcgcgctggggctcgcccggcttgcgaagctcgcccccgatgcgcgccgg
gtcggcctctccgccacagtcgcctatccggactcgctcgaggcctatctctcgcccacc
ggccggcacggcgcgggagacgtcgcgcgggtggccggcggcggcgccgtcgcggccgag
gtcgagatcatgatcgggcgcggtcatttcccctggtccggccatatgggaacctacgcc
gtcgaagacatctacgaacagatctgcggcgccgggaccacgctggtcttcgtcaatacg
cgcgcgcaggcggagatccttttccaggcgctctggcgggtgaatgagcagaacctgccg
atcgccctgcatcacggttcgctttcggccgaacagcggcgcaaggtcgaggcggtgatg
gcgaatggcggtcttcgggcggtggtcgccacctcctccctcgatctcggcatcgattgg
gcggcggtcgacctcgtaattcaggtcggcgcgccgaaaggctcgtcgcggctgctgcag
cggataggacgcgccaatcaccggctcgaccagccaagccgcgcgatcctgatcccggcc
aaccgcttcgaagtgctggaatgccaagccgcgatcgacgccgtaaaggagatgacgctc
gacggcgagctgccgagcggaggttcactcgacgtcctggcccagcacatcctcggcacc
gcctgctccggccccttccacccgaaccggctctacgaggaaatccgcaccgccgcaccc
tatacagaactatcccgcgaggatttcgacgccgtgctgcgcttcgtgacggatggcgga
tatgcgctccgcacctatgatcgcttccggcgcctgcgccctacggcagacggaaagtgg
accgtcgtgaacgagagggtggcgcatgcctaccggatgaatgtcggcaccatcgtcgag
gcagtcacgctgaaggtccgcatgcgccgcggccgcttcctcggcgagattgaggagtat
ttcgtccagggcctgacgccgggcgacaccttcctcttcgccggaaaactcctgacgttc
gagggcgtgcgggagaccgttgtagaggtcagccccggcggcggcgaagagcctgaaatc
ccggcctatatgggaggccggctacctttcacgactcatctctcccagcgtgtccgcgcc
atgctggaggacgaccgggactggccgatgctccccgcaccggtcgaggactggctgcgc
atgcagcaatggcgttctgtcatgccgaaacgggaccggctgctggtcgagatcttcccc
cgttcgggcaaattctatctcgtcgcctactgctttgccggccgcaacgcgcaccagacc
ctcggcatgctgctgaccaagcgcatggagcgggccggactggacccgctcggcttcgtc
gcgagcgactacgtgatcggggtttggagcctgaaagagccgcgcagggaggatgtagaa
gcactgtttgaccagaacatgctcggcgacgatctcgaggaatggatggcagactcgacc
ctgctgaaacgcactttccgcaatgtcgcggtgatcgccgggctgatcgaacgcaagctt
cccgggcacgagaaaaccggccgccaggtcaccatcaatgccgacctgatctacgacgtg
ctgcgcagccacgagccggaccatatcctgctccgcgccacgcgggccgacgcggcacgc
ggtctgaccgacatccggaggctcgccgatttcctggtcgaggtgcagggacggatcgac
gtgcgtcctctagaccgtgtctccccgctcgcggtgccgatcctgctggagatcggcaag
gagcaggtctatggaggcgccatggatacgttgctcgaggaagcggaagccgaactcgtc
gcggaggctactggcggcgacatgcaggcgcagctgccgatctga

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