KEGG   Nocardia asteroides: NCTC11293_00463
Entry
NCTC11293_00463   CDS       T06742                                 
Symbol
yddM
Name
(GenBank) Uncharacterized HTH-type transcriptional regulator YddM
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
nad  Nocardia asteroides
Brite
KEGG Orthology (KO) [BR:nad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nad03000]
    NCTC11293_00463 (yddM)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nad02048]
    NCTC11293_00463 (yddM)
Transcription factors [BR:nad03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    NCTC11293_00463 (yddM)
Prokaryotic defense system [BR:nad02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    NCTC11293_00463 (yddM)
SSDB
Motif
Pfam: HTH_3 HTH_31 Peptidase_M78 HTH_37 YdaS_toxin HTH_26 Peptidase_U49 WLM
Other DBs
NCBI-ProteinID: VEG31447
LinkDB
Position
1:452982..454061
AA seq 359 aa
MIESTGLPAQAFPAGEYLRDEIEARGWTISEFAQILGRPPQAVSEILNGHKEITPETALE
IAAATGTEAATWLRLQNTYRLWKLARTADPTRTTAVSRRARLAQLVPMPELRQRGIIPAG
ASLDDEEAAVCDLLQISDITEPPAFEFAARRSDESAPISPAQLAWIACVQREAGRSEPDL
PPLGDLSALAAATVRLTREPSKIAVLPDMFAQNGIRLLYVKAFNSGKIDGGAYLDKAGLP
VIGLSGRIQRIDSVVFTLLHELAHVALGHLDNGIRVDSDVCSATEDETERAADRLATRWA
LPEKIALSAPISKRAVLQRATALEVHPGLIVGRLQYQRILPWTHLRDLTPNVRQFLASW
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgatcgagagcactgggctgcctgcgcaggcattcccggcaggcgagtacctgcgggat
gagatcgaagcacgtggctggacgatctccgaattcgcccagattctcggcagaccacca
caggcggtttccgaaatcctgaacggccacaaggagataactccggagaccgcgctcgag
attgcggccgcgacggggaccgaggccgctacctggctgcgactccagaacacctatcgg
ctctggaaactcgcccgaaccgccgacccgacacgaacgactgcggtatcccggcgcgca
cgcctcgcccaactcgtcccgatgccggaacttcggcagcgtggaatcatcccggcggga
gccagtctcgacgacgaagaggcagcggtgtgcgatctcttgcagatctccgacatcacc
gagccgccggcgttcgaattcgccgcacgccgatccgacgaaagcgcaccgatctcaccc
gcacagctcgcctggatcgcctgtgtccagcgagaagctggccggagcgagcccgatctt
cccccactgggagacctttcggcgctcgcggccgcgaccgttcggctgacacgagaacca
tcgaagatcgcggtccttccggatatgttcgcgcagaatggaatccgccttctctacgtg
aaagccttcaattcggggaagatcgacggcggcgcctacctggacaaagcgggtttaccg
gtgatcgggctgtcggggcggatccagcgaattgacagcgtggtgttcacgctcctgcat
gagctcgcgcacgtagcactgggtcacctggacaatggaattcgggtggactccgatgtc
tgctcggcgaccgaggatgaaactgagcgtgctgcggatcgactggccacgcggtgggcg
cttccggagaagatcgctctttcagctccgatatcgaagcgtgccgtcctacagcgcgcg
acagcattggaggtgcatcccggattgatcgtgggcagactccaataccagcgaatcctc
ccatggacccatctgcgtgacttgactcccaacgtccgtcagttcctggcgtcttggtga

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