KEGG   Nocardia asteroides: NCTC11293_01830
Entry
NCTC11293_01830   CDS       T06742                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nad  Nocardia asteroides
Brite
KEGG Orthology (KO) [BR:nad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nad03400]
    NCTC11293_01830
Enzymes [BR:nad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCTC11293_01830
    5.6.2.6  RNA 3'-5' helicase
     NCTC11293_01830
DNA repair and recombination proteins [BR:nad03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NCTC11293_01830
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr WHD_4th_Lhr WHD_2nd_Lhr DEAD Helicase_C ResIII AAA_25 DUF6406 PhoH
Other DBs
NCBI-ProteinID: VEG33530
LinkDB
Position
1:complement(1940919..1945961)
AA seq 1680 aa
MDRFSPATAQWFDGAFPGPTSAQLGAWDAISAGQHTLVVAPTGSGKTLSAFLWAIDQLAT
RPPAEPDEQRGTSVLYVSPLKALAVDVERNLRAPLVGVTQTAKRLGLDPPAITVGVRSGD
TTPAQRRAMQRTPPDILITTPESLFLVLTSAARETLAQVGTVIVDEVHAIAGGKRGAHLA
LSLARLDQLTERPAQRIGLSATVRPPEEVGRFLVGSAPITIVRPPAPKTFDLSVRVPVAD
MTDPGDSDQPGSIWPHVDEAIVDLVLEHRSSIVFANSRRLAERLTARLNEAYAARLGEPV
DTEHAPPAQLGPSTEVIHGADQLLARAHHGSVSKEQRALIEDDLKSGRLRCVVATSSLEL
GIDMGAVDLVVQVEAPPSVAGGLQRVGRAGHQVGEVSRGVLFPKHRTDVVHCTVAAQRML
AGEIEALQIPAHPLDILAQQTVAACALEPIDVDTWFDIVRATGSYANLPRSAYESVLDLL
AGRYPSDEFAELRPRVVWDRDAGTLTGRPGAQRLAVTSGGAIPDRGMFAVFMVGEKASRV
GELDEEMVYESRVGDVFALGATSWRIEEITFDRVLVSPAFGLPGRLPFWHGDSLGRPAEL
GAALGEFVRDAGQVSADELGRIVAGMGTVPDADTPATGTAAEGGSRPGHAGSAARATSRR
AEASPELSKPGARLDHLVRTAGLDQNAAANLVGLLEEQRGATGQLPTDRTMIVERFRDEL
GDWRLVLHSPYGTPVHAPWALAVGARLQERFGIDAAPTASDDGIVVRLPDTTDDPPGAEL
FVFEPDEIDDIVTEQVGGSALFASRFRECAARALLLPRRDPGKRAPLWQQRQRSAQLLDV
ARKFPDFPILLETVRECLRDVYDLPSLRDLLTRVARREVRLVDVETASPSPFANALLFSY
IGQFLYDGDSPLAERRAAALALDSSLLAELLGRVELRELLDPAVIALTERELQRLTPERW
ARDAEGLADLLRLLGPLTPAEAAARCVRRDGTGPHEAGQPHQSTAGGAHPPAADSAAHTT
DEATDSPHESGGDQPAGEASVPDDDLLAVSDAPVWFTQLRDSHRALEVSFAGRTWWVAVE
DAARLRDALGVPLPIGVPAAFIEPVPDPLGDLVGRYARTHAPFSTADVAARFGLGPAVAA
TALHRLLAEKRVVEGEFTPATAGTEWCDAQVLRRLRRRSLAAARHEVEPVSTAALGRFLP
AWQHVGSGELRGIDGVATVVEQLAGVPIPASAWESLILPMRVRDYSPAMLDELMATGEVI
WSGHGAITARDGWIALHLADQAPFTLPPPDEIDTTEVQLGLLAALGADLEPWPPARAPGA
RPVELDTESAPTGNGADPADVRRDLAPRASAPSSDDGDPSPGDNAPAIRLPASLHGGGAF
FFRQLSDATGLLDDKAVGDALWQLVWAGYVSGDTFAPVRALLSGTARSTTAHRTPRRAPR
GRAYLPRPSMPTRSGPPTLAGRWSILPERVQDNTLRAHATADQLLERYGVLTRGAVQNEG
VPGGFALMYRVLTEFEDRGRCRRGYFVDTLGGAQFSTTDTVDRLRSFDTERGTDKPGVAL
ALAACDPANPYGAALPWPKGDAEGGHRPGRKAGALVVLVGGDLVLYVERGGKTLLSFTED
PGLRRLAASALAGLVTDRRVDGLVVDKINGETVHGNTFADLLVEAGFSMTPRGLRLRRQV
NT seq 5043 nt   +upstreamnt  +downstreamnt
atggatcggttctcccccgccaccgcgcagtggttcgacggcgccttccccggccccacg
tcggcccagctcggcgcgtgggacgccatctccgccgggcagcacacgctggtggtggca
ccgaccgggtccggcaagacgctgtcggcgttcctgtgggcgatcgaccagctggccacc
aggccgcccgccgagccggacgagcagcgcggtacctcggtgctctacgtctcgccgctc
aaggcgctggccgtggacgtggagcgcaatctgcgggcgccgctggtgggcgtcacgcag
acggccaagcggctggggctggacccgcccgcgatcacggtgggggtgcggtccggtgac
accacgcccgcgcagcgccgggcgatgcagcgcacgccgcccgacatcctgatcaccacc
ccggagtcgctgttcctggtactcacctccgcggccagggagaccctggcgcaggtcggg
acggtcatcgtcgacgaggtgcacgccatcgccggtggcaagcgcggcgcgcatctggcg
ctgtcgctggcccggctggaccagctcaccgagcggcctgcgcagcggatcggcctgtcg
gccacggtgcgcccgcccgaggaggtcggccggttcctggtggggtcggcgccgatcacc
atcgtgcgcccgcccgcgcccaagaccttcgacctgtcggtccgcgtcccggtcgccgac
atgaccgatcccggcgactccgaccagccgggttccatctggccgcacgtcgacgaggcc
atcgtcgacctggtcctcgaacaccggtcctccatcgtgttcgccaattcgcgccgcctc
gccgaacggctcaccgcccggctcaacgaggcctacgccgcccgcctgggcgaaccggtg
gacaccgagcacgcgccacccgcccagctcgggccgtccaccgaggtgatccacggcgcc
gatcagctgctggcgcgggcccatcacggctcggtcagcaaggagcagcgcgcgctcatc
gaggacgacctcaagagcgggcggttgcgctgcgtggtggccaccagcagtctcgagctc
ggcatcgacatgggcgcggtggacctggtggtgcaggtggaggcgccgccgtcggtggcg
ggcgggttgcagcgggtgggccgggccgggcatcaggtcggtgaggtgtcgcggggcgtg
ctgttccccaagcaccgcaccgatgtggtgcactgcaccgtcgccgcccagcgcatgctg
gcgggcgagatcgaagcgctgcagatccccgcgcatccgctcgacatcctggcccagcag
accgtggccgcctgcgcgctggaaccgatcgatgtggacacctggttcgacatcgtccgc
gccaccggcagttacgccaacctgccgcgctcggcctacgagtccgtgctcgacctgctg
gccggccgctacccctccgacgagttcgcggagctgcgcccgcgggtggtgtgggaccgc
gacgcgggcaccctcaccggccgtcccggcgcgcaacggctggccgtcacctccggcggc
gccatccccgaccgcggcatgttcgcggtgttcatggtgggcgagaaggcgtcccgggtg
ggcgaactcgacgaggagatggtctacgagtcccgcgtcggcgatgtgttcgccctcggc
gccaccagctggcggatcgaggagatcaccttcgaccgggtcctggtctcccccgcgttc
ggcctgccgggccggctcccgttctggcacggcgacagcctgggccgccccgccgaattg
ggtgccgcgctgggcgaattcgtgcgcgacgcgggccaggtgagcgccgacgaactcggc
cgcatcgtcgccggaatgggcacggtgcccgacgcggacaccccggcgaccggcaccgcg
gccgagggtgggtcccggcccggccacgccggttcggctgcccgcgcgacgtcacgccgg
gccgaggcgagtcccgaattgagcaagccgggggcccgcctcgaccacctggtacgcacg
gccgggctggatcagaacgccgcggcgaatctggtcggcctgctggaggaacagcgtggc
gccaccgggcagctgccgaccgatcgcacgatgatcgtcgaacggttccgcgacgagctc
ggcgactggcggctggtcctgcactccccctacggcacccccgtgcacgcgccgtgggca
ctcgccgtcggcgcccgcctccaggagcggttcgggatcgacgccgcgcccaccgcctcc
gacgacggcatagtggtgcgcctgcccgacaccaccgacgacccgcccggcgccgaactg
ttcgtcttcgaacccgacgagatcgacgacatcgtcaccgaacaggtcggcgggtcggcg
ctgttcgcgtcccggttccgggagtgcgcggccagggcactgctgctgccgcgccgcgac
cccggcaagcgggccccgctgtggcagcagcggcagcgctcggcccaattgctcgatgtg
gcacgcaagttcccggatttcccgatcctgctggagacggtccgcgagtgcctgcgcgac
gtctacgacctgccctcgctgcgcgatctgctcacccgggtcgcccggcgcgaggtgcgg
ctggtcgacgtggagaccgcgagcccgtccccgttcgccaatgccctgctgttctcctac
atcggccagttcctctacgacggcgacagccccctcgccgaacgccgggccgccgccctg
gcactggattcgagcctgctcgccgaactgctcggccgcgtcgaactgcgcgaactcctc
gaccccgcggtcatcgcgctcaccgaacgcgaactccagcgcctcactcccgaacgctgg
gcccgcgacgccgagggcttggccgacctgctgcgcctgctcggccccctcaccccggcc
gaggccgccgcccgctgtgtgcgacgcgacggcaccggtcctcacgaggccgggcagccg
catcagagcacagcgggcggcgcgcacccgccggcggccgacagcgcggcgcacaccacc
gacgaggcgaccgactccccgcacgaatccggcggtgatcaaccggccggcgaagcgtcc
gtcccggacgacgacctcctcgcggtctccgatgcccccgtgtggttcacgcaactacgc
gattcccatcgcgcactggaggtttcgttcgcgggccggacctggtgggtggcggtcgag
gatgccgcccgcctgcgggacgcgctcggggtcccgctgccgatcggtgtgcccgcggcc
ttcatcgagcccgtaccggatccgctcggtgatctcgtcggccgctatgcccgcacccac
gcaccgttcagcaccgccgacgtcgccgcgcgcttcggcctcggcccggccgtggccgcc
accgccctgcaccggttgctcgccgagaagcgggtggtggaaggcgaattcacgcccgcg
acggcggggacggagtggtgcgacgcccaggtgctgcgccggctgcggcgtcgctcgctg
gcggccgcccggcacgaggtggagccggtgtccaccgccgcgctgggccgtttcctgccc
gcctggcagcacgtcggctccggcgaactgcgcggcatcgacggcgtcgccaccgtggtg
gaacagctggcgggcgttccgattccggcctcggcctgggaatcgctgatcctgccgatg
cgcgtgcgcgactattccccggccatgctcgacgagctgatggccaccggcgaggtgatc
tggtccggccacggcgccatcaccgcccgcgacggctggatcgccctgcacctggccgac
caggcccccttcaccctgccgccgcccgacgagatcgataccaccgaagtccagctcggc
ttgcttgccgccctcggcgccgacctcgaaccgtggcctccggctcgcgcccctggggcc
cggccggtcgagctcgacaccgagtcagcgccgaccgggaacggcgccgatccggctgac
gtgcgccgcgacctggctcctcgcgcgtccgctccatcatcagacgacggcgacccgagc
cccggcgacaacgctccggcgatccggctgccggcttccctgcacggcggcggcgcgttc
ttcttccgccagctctccgatgccaccggcctgctggacgacaaggccgtcggcgacgcg
ctctggcagctggtctgggcgggctacgtctccggcgacaccttcgcccccgtccgcgcg
ctgctgtccggcaccgcccgcagcaccaccgcgcaccgcacaccccgccgggcaccgcgt
ggtcgcgcctacctgccgcgcccgtccatgcccacccgcagcggcccgcccacgctggcc
gggcgctggtccatcctgccggaacgggtgcaggacaacaccttgcgcgcgcacgccacc
gccgatcagctgctcgaacgctacggcgtgctgacccgcggcgcggtgcagaacgagggg
gtgccgggcggtttcgcgctgatgtaccgggtgctcaccgagttcgaggatcgtggccgg
tgccggcgcggctacttcgtcgacacgctcggcggcgcccagttctccaccaccgacacc
gtcgaccggctgcgctccttcgacaccgaacgcggcaccgacaagcccggtgtcgcgctg
gccctggccgcctgtgacccggccaatccgtacggcgcggcactgccatggcccaagggt
gacgccgagggcgggcaccggcccggccgcaaggcgggcgcgctggtggtattggtcggc
ggcgacctggtgctctatgtcgaacgcggcggcaagaccctgctcagcttcaccgaggac
ccggggctgcgcaggctggccgcgagcgccctggccggcctggtcaccgaccgcagggtc
gacggcctggtggtcgacaagatcaacggggagaccgtgcacggcaacaccttcgccgac
ctgctggtcgaggcgggtttctcgatgacgccgcgcgggttgcggctgcgcaggcaggtg
tag

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