Nocardia asteroides: NCTC11293_02856
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Entry
NCTC11293_02856 CDS
T06742
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nad
Nocardia asteroides
Pathway
nad03030
DNA replication
nad03430
Mismatch repair
nad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11293_02856 (dnaE_2)
03430 Mismatch repair
NCTC11293_02856 (dnaE_2)
03440 Homologous recombination
NCTC11293_02856 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nad03032
]
NCTC11293_02856 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_02856 (dnaE_2)
Enzymes [BR:
nad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11293_02856 (dnaE_2)
DNA replication proteins [BR:
nad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11293_02856 (dnaE_2)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11293_02856 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
VEG34528
LinkDB
All DBs
Position
1:3016317..3019862
Genome browser
AA seq
1181 aa
AA seq
DB search
MASSGSFVHLHNHTEYSMLDGAAKISPLFAEAERLGMTAVGMTDHGNMYGASEFYNSAKK
AGIKPIIGIEAYIAPGSRFDTKRVQWGDPGQKGDDVSGSGAYTHMTMVAENATGLRNLFK
LSSLASIEGQLGKWARMDEEIIAQYAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQ
EIFGKDNFFLEVMDHGLSIERRVREGLMMVSKQLDIPPIATNDCHYVTKDQSTNHEALLC
IQTGKTLSDPTRFKFDGDGYYLKSAAEMRAIWDAEVPGACDNTEIIGERVQSYDDVWAHR
DRMPIFPVPEGETQATFLHKEVMRGLDRRFPDGPPRDYVDRAEYELSVINQMGFPAYFLV
VGDLIRHALDVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDID
IDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAAIKDSARVLFGQPGFAIADQITK
ALPPPIMAKDIPVSGITDPEHERYKEAAEVRELIGSNPDVAKIYETALGLEGLIRNAGVH
ACAVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALEN
IKANRGIDLDMDHLPLDDKATYELLARGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKEILADTFGLIVYQEQIMQIAQK
VAGYSLGQADILRRAMGKKKLSVLEEAYAGFREGMLANDFSEPAIKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLSDCRKMGITVLPPDV
NESEQNFASVGKDIRFGLGAVRNVGANVVSSIIAARKEKSKFTDFSDYLNKIDAIACSKK
VTESLIKAGGFDSLGHPRKGLLLIHSDAIDAVMSTKKAEAIGQFDLFGGLDDGDDSVASV
FNVKVPEDEWETKHKLALEREMLGLYVSGHPLNGVEHVLAAQVDTPIPAILEGDVKDGAQ
VTIGGILASVNRRINKNGLAWASAQLEDLTGGVEVLFFPQSYSVYGMDVVEDAVVLVKAR
VSVRDDRISLIANDLVVPDLSAIGVAKPVSVVMTTRMCTPDKIGELKKVLSRHPGTSDVH
VRHVGAREKTTLLKLDDSWRVSPSSALMGDLKALLGPGCLG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ttggcttcgtccggatcgttcgttcacctgcacaaccacaccgagtactccatgctcgat
ggtgcggcgaagatttcgccgctgttcgcggaggcggaacggctgggcatgaccgccgtc
ggcatgaccgaccacggcaacatgtacggcgcctcggagttctacaacagcgccaagaag
gcgggcatcaagccgatcatcggcatcgaggcctacatcgcgccgggctcccggttcgac
accaagcgcgtgcagtggggcgatcccggccagaagggcgacgacgtctcgggttcgggc
gcctacacccacatgacgatggtcgccgagaacgcgaccggcctgcgcaacctgttcaaa
ctgtcgagcctggcctccatcgagggccagctcggcaagtgggcgcgcatggacgaggag
atcatcgcgcagtacgcggagggcatcatcgccacgacgggctgcccgtcgggtgaggtg
cagacccggctgcgcctcggtcacgaacgcgaagccctcgaggccgccgccaagtggcag
gagatcttcggcaaggacaacttcttcctcgaggtgatggaccacggtctgtcgatcgag
cgccgggtccgcgagggcctgatgatggtgagcaagcagctcgacatcccgccgatcgcc
accaacgactgccactacgtcaccaaggaccagtcgaccaaccacgaagcgctgctgtgc
atccagaccggcaagacgctgtccgaccccacccgcttcaagttcgacggtgacggctac
tacctgaagtcggccgcggagatgcgcgccatctgggacgccgaagtccccggcgcgtgc
gacaacaccgagatcatcggcgaacgcgtgcagtcctacgacgacgtgtgggcccaccgc
gaccggatgccgatcttcccggtgcccgagggcgagacccaggccaccttcctgcacaag
gaggtcatgcgcggcctggaccggcggttcccggacggccccccgcgcgactacgtcgac
cgcgccgagtacgagctctcggtcatcaaccagatgggcttcccggcgtacttcctcgtc
gtcggtgacctcatccggcacgccctcgacgtcggtatccgcgtcggccccggccgtggt
tcggccgcgggctcgctcgtcgcctacgcgatgggcatcaccaatatcgacccgatcccg
cacggtctgctgttcgagcggttcctcaaccccgagcgcgtgtcgatgcccgatatcgat
atcgacttcgacgatcgccgccgcggtgagatggtccgctacgccaccgagaagtggggc
agcgaccgggtcgcccaggtgatcaccttcggcaccatcaagaccaaggccgcgatcaag
gactccgcgcgagtcctgttcggccagcccggtttcgccatcgccgaccagatcaccaag
gcgctgccgccgccgatcatggccaaggacatcccggtctcgggcatcaccgatccggag
cacgagcggtacaaggaagccgccgaggtccgcgagctgatcgggtccaatcccgatgtc
gccaagatctacgagaccgcgctgggcctggagggcctgatccgcaacgccggcgtgcac
gcctgcgcggtcatcatgtcctccgagccgctcactgacgcgatcccggtgtggaagcgc
gcccaggacggcgcgatcatcaccggctgggactatccgtcgtgcgaggccatcggcctg
ctgaagatggacttcctcggtctgcgcaacctcaccgtcatcggtgacgcgctggagaac
atcaaggccaaccgcggcatcgatctggacatggatcacctgccgctcgacgacaaggcc
acctacgaactgctcgcccgcggcgacaccctcggcgtgttccagctcgacggcagcgcc
atgcgcgacctgctgcgccgcatgcagcccaccggcttcgaggacatcgtcgccgttctc
gcgctgtaccggcccggtccgatgggcatgaacgcccacaacgactacgccgaccgcaag
aacggccgccaagaggtcaaaccgatccatcccgagctcgaagagccactgaaggagatc
ctggccgacaccttcggcctgatcgtctatcaggaacagatcatgcagatcgcgcagaag
gtggccgggtactcgctcggccaggccgacatcctgcgccgcgccatgggtaagaagaag
ctgtcggtgctggaggaggcctacgcgggcttccgcgagggcatgctggccaacgacttc
tccgagcccgccatcaaggcgctgtgggacaccatcctcccgttcgccggctacgcgttc
aacaagtcgcacgccgccggctacggcctggtgtccttctggaccgcctacctgaaggcc
aactatcccgccgagtacatggccggtctgctcacctccgtcggcgacgacaaggacaag
gccgccatctacctgtcggactgccgcaagatgggcatcacggtgctgccgccggatgtc
aacgagtccgagcagaacttcgcctcggtcggcaaggacatccgcttcggtctcggcgcg
gtccgcaatgtcggcgccaacgtggtgtcctcgatcatcgccgcccgcaaggagaagtcg
aagttcaccgacttctccgactacctgaacaagatcgacgcgatcgcctgttccaagaag
gtcaccgaatcgctcatcaaggcaggcggtttcgactcgctcgggcatccgcgcaagggc
ctgctgctgatccactccgacgcgatcgacgcggtgatgtcgaccaagaaggccgaggcg
atcggccagttcgacctgttcggtggcctcgacgacggtgacgactcggtcgcctcggtg
ttcaacgtgaaggtccccgaggacgagtgggagaccaagcacaaactcgccctcgagcgg
gagatgctgggcctctacgtctccggccatccgctcaacggtgtcgagcacgtgctggcc
gctcaggtcgacaccccgatcccggcgatcctggaaggcgacgtcaaggacggcgcgcag
gtgaccatcggcggcatcctggcctcggtcaaccgccggatcaacaagaacggcctggcc
tgggcctcggcgcagctggaggacctcaccggtggtgtggaggtgctgttcttcccgcag
tcctactcggtgtacggcatggacgtggtcgaggacgccgtggtgctggtcaaggcgcgg
gtgtcggtccgtgacgaccggatctcgctgatcgccaacgacctggtggtgcccgacctc
tcggccatcggtgtcgccaaaccggtgtcggtggtgatgacgacgcgcatgtgcacaccc
gacaagatcggcgagctcaagaaggtgctctcccgtcatcccggtacctccgacgtgcat
gtccgccatgtcggcgcccgcgagaagaccaccctgctcaagctcgacgacagctggcgg
gtcagtccctcctccgcgctgatgggcgacctgaaggcgctgctcggtcccggctgcctg
ggctga
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integrated database retrieval system
