Nocardia asteroides: NCTC11293_02961
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Entry
NCTC11293_02961 CDS
T06742
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nad
Nocardia asteroides
Pathway
nad03030
DNA replication
nad03410
Base excision repair
nad03420
Nucleotide excision repair
nad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11293_02961 (polA_1)
03410 Base excision repair
NCTC11293_02961 (polA_1)
03420 Nucleotide excision repair
NCTC11293_02961 (polA_1)
03440 Homologous recombination
NCTC11293_02961 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nad03032
]
NCTC11293_02961 (polA_1)
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_02961 (polA_1)
Enzymes [BR:
nad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11293_02961 (polA_1)
DNA replication proteins [BR:
nad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC11293_02961 (polA_1)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC11293_02961 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11293_02961 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
VEG34629
LinkDB
All DBs
Position
1:3129407..3132169
Genome browser
AA seq
920 aa
AA seq
DB search
MSVVVPTLIRVSSPTTAQASTTTTASGGERPTLLLLDGHSLAYRAFFALPAENFKTVTGQ
TTNAVYGFTSMLINLLRDEKPSHVAAAFDVSRKTFRTEAYPEYKANRSATPDEFRGQVEL
TKDVLGALGIPVMAIDGYEADDVIATLTTQAVAQGYRVFIVTGDRDAIQLVNDDVTVLYP
RKGVSDLTRFTPAEVETKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGD
LATLVDKVDQVKGKVGDALRANLSSVVLNRQLTEMVREVPLPYTPDQLAQAPWDREKIHQ
LFDDLEFRVLRDRLFETLGSAEPEAESGFEISGGALDQGAVTDWLVEHAKAGVRHGISIA
GTGTPVHGEARALAIAAADGEGGYIDLTVLTPEDEAALAAWLADPAVPKALHEAKAAGHA
LRGRGFTLSGLTSDTALSAYLVRPGQRSFNLDDLSLRYLKRELRAETGDSGQLSLLDDED
TVAEQTARELMLRARAVADLADALDAELAQIESTALLEEMELPLLGVLAELEEAGIAVDV
AQLESLQRQFADRVTEAANAAYDVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTTD
ADALESLFEKTGHAFLEHLLAHRDATRLKVTVDGLLKSVADDGRIHTTFNQTIAATGRLS
STEPNLQNIPIRTDTGRQIRDTFVVGAGYTELMTADYSQIEMRIMAHLSGDEGLIEAFNS
GEDLHTFVASKAFDIPLSEVTPEMRRRIKAMSYGLAYGLSSYGLSAQLKISTAEAKEQMD
VYFDRFGGIRDYLSEVVDEARKVGYTQTLFGRRRYLPDLDSSNRQRREAAERMALNAPIQ
GTAADIIKVAMINVQNAIREAGLRSRMLLQIHDELVFEVAEGEREALETLARDQMSAAIE
LSVPLTVSVGTGRSWDSAAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtggtggtccctacactcatccgggtgagttcaccgacgactgctcaggcatcg
acaacgaccactgcctccgggggtgagcggcccacgctgctgctcctggacgggcactcg
ctggcgtaccgcgcgttcttcgcgctaccggcggagaacttcaagaccgtcaccgggcag
accaccaacgcggtgtacgggttcacctcgatgctgatcaacctgctgcgcgacgagaag
cccagccacgtggccgcggcgttcgacgtgtcccgcaagaccttccgcaccgaggcgtac
ccggagtacaaggccaaccgcagcgcgaccccggacgaattccgcggccaggtcgaactc
accaaggacgtcctcggcgcgctgggcatccccgtgatggccatcgacggctacgaggcc
gacgacgtcatcgccacgctcaccacccaggccgtggcccagggctaccgggtcttcatc
gtcaccggcgaccgcgacgcgatccagctggtcaacgacgacgtcaccgtgctgtacccg
cgcaagggcgtctccgacctgacccggttcactcccgccgaggtggagaccaagtacggt
ctcacgccggcccagtaccccgactacgcggcgctgcgcggcgatccgagcgacaacctg
cccggcatccccggcgtcggcgagaagaccgccgccaagtggatccgcgaatacggcgat
ctggccaccctcgtcgacaaggtcgaccaggtgaagggcaaggtcggcgacgcgctgcgg
gccaacctgtccagcgtggtgctcaaccgccagctcaccgagatggtgcgcgaggtaccg
ctgccctacacccccgatcagctggcgcaggcgccgtgggaccgggagaagatccaccag
ctcttcgacgacctggagttccgggtcctgcgcgaccggctgttcgagaccctcgggtcc
gccgagccggaagccgagtcggggttcgagatcagcggaggcgccctggaccagggcgcg
gtcaccgactggctggtcgagcacgcgaaagctggtgtgcggcacggcatctcgatcgcg
ggcaccggcaccccggtgcacggtgaggcccgcgcgctggccatcgccgccgctgacggt
gagggcggctacatcgacctgaccgtgctgacccccgaggacgaggccgcgctggccgcc
tggctggccgaccccgccgtcccgaaggcgctgcacgaggccaaggccgcggggcacgcg
ctgcgcgggcgggggttcaccctgtcggggctcaccagcgacaccgcgctctcggcctac
ctggtccggcccggtcagcgcagcttcaacctcgacgacctgtcgctgcgctacctcaag
cgcgagctgcgcgccgagaccggcgactccggccagctctcgctgctcgacgacgaggac
accgtcgccgagcagaccgcgcgcgagctgatgctgcgcgcccgcgccgtcgccgatctc
gccgacgccctcgacgccgagctggcccagatcgagtcgaccgccctgctcgaggagatg
gagctgccgctgctcggcgtgctcgccgagctcgaggaggccggcatcgcggtcgacgtg
gcccagctcgaatcgctgcagcgccagttcgccgaccgggtcaccgaggccgcgaacgcc
gcctacgacgtgatcggcaagcagatcaacctcggctcgcccaagcagctgcaggtggtg
ctgttcgacgagctcgacatgcccaagaccaagcgcaccaagaccggttacaccaccgac
gccgacgcgctggaatcgctgttcgagaagaccggccacgccttcctcgagcacctgctc
gcgcatcgcgacgccacccggctcaaggtcaccgtcgacggcctgctcaagtcggtcgcc
gacgacggccgcatccacaccaccttcaaccagaccatcgccgccaccggcaggctctcc
tccaccgagccgaacctgcagaacatcccgatccgcaccgacaccggccgccagatccgc
gacaccttcgtcgtcggcgccggctacaccgagctgatgacggccgactacagccagatc
gagatgcggatcatggcccacctctccggcgacgagggcctgatcgaggccttcaactcc
ggcgaggacctgcacaccttcgtggcctcgaaggccttcgacatcccgctgtcggaggtc
accccggagatgcgccgccggatcaaggcgatgtcctacggtctggcctacggcttgagc
tcctacggactgtcggcccagctgaagatcagcacggccgaggccaaggagcagatggac
gtctacttcgaccgtttcggcggtatccgcgactacctgtccgaggtcgtcgacgaggcc
cgcaaggtcggctacacccagaccctgttcggtcgccgccgctacctgcccgacctggat
tccagcaaccgccagcgccgcgaggccgccgagcggatggcgctcaacgcccccatccag
ggcaccgcggccgacatcatcaaggtcgcgatgatcaacgtgcagaacgcgattcgcgag
gcgggcctgcgttcgcggatgctgctgcagatccacgacgaactcgtcttcgaggtcgcc
gagggcgagcgggaagcgctcgagaccctggccagggaccagatgtcggcggccatcgag
ctctcggttccgctcaccgtctcggtgggcaccggccgcagctgggactccgcggcgcac
tga
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