Nocardia asteroides: NCTC11293_03186
Help
Entry
NCTC11293_03186 CDS
T06742
Symbol
ppsC_2
Name
(GenBank) Beta-ketoacyl-acyl-carrier-protein synthase I
Organism
nad
Nocardia asteroides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
ADH_zinc_N
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
ADH_zinc_N_2
ADH_N
PP-binding
Thiolase_N
Epimerase
DUF7080
YjeF_N
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
VEG34851
LinkDB
All DBs
Position
1:3355568..3361966
Genome browser
AA seq
2132 aa
AA seq
DB search
MSDIAIVGIGCRFAGGIDSPESFWDFVVDKRDGVVDIPADRWDYRRYYDPEPRTPGRAYT
KRGAFLTTDPWEFDPDFFGISPREATVLDPQQRLLLEVTWEALDDAGIAGGAAGAQVGVY
VGGFVVDQSVIGVVGPALFHTDMHTPASASYTMLSNRIAYALNLVGPAITVDTACSSSLV
AFHLACQALANDDCRVALAGGVNVMLQPETFVLMCKGGFLATDGRCKSFDAAADGYGRGE
GAGMVALKRLDDAVADGDRIYAVVKATGSNQDGRTTAITVPNADSQEALARTVCARSGLA
PSAITYLEAHGTGTLVGDPVELRALGRVFGAASGRIGSVGVGSVKATIGHTEAAAGVASV
IKAALAISHRTLPPQGWLDTPNPDIPFADLGLHVQTAAEPLAADAGPMSVAVNGFGYGGT
NAHAILAEFTGQQAPSAPHRHLGILPISARGTGAARALAGRFADLLTAGADPDHLAEAAW
TRMAHHPFRTGVLLGDSTEDLIRDLRGYAAGEGRDAARTVVSAAAEPVFVFSGMGPQHWR
MGRDLLGAGGVFAETAHRIDAEFRAVAGWSIIAELLRPEAESRIGRTEVAQPANFLIQVG
LVAELAEYGITPAAVVGHSVGEVSAAYVSGMLTLRDAVRVAYHRARLQASTAGTGGMLAV
GTPPDQAEALVAGDPHVDIAAVNSPAAVTLSGAVDRLDDLAERLTEDGVFARRLRVEVPY
HSRLMDPIEDELRAVLADLTPRQPTVPLYSTVTGELVTEGDWDAEYWWSNVRQPVRFAAA
VGRLLAAGSRVIVEVGPHPVLSGNIREALVDADVVGTTVPTLDREQADQDSLRRTLIGLH
AAGVLDRAALFPADRPVTPHLPLPRYPWQRTRLHAALPLFEQARLGTPDGYAMLGDPDVE
GRPEWLLQVGTELLPWLADHVVNGVKIMPGAAYLDAALSATASRLGVKQVALEQVRFVAP
LIMGAPDVPLVALSIEEASGRFLLRSRSATGTAWTVHASGRTLTGGYEQTTVAVPEIEVG
IDVDPELFYAGLAAAGLQYGPSFRRVTSVRVGADVVVATVDGGIAAGSGHLAHPAVVDAA
MQCAAMLFADDRITEGVMVPVGVAAVRLLAELPETVTVVARRDVGARLRADVDLLDGDRR
LIARLTGLQIGALKPGDDPLHRMADFYYADTMTELEPIDLAALTDAGPAATVVVELGDTE
TAVELAAAIPGAQVYVAHPEDPDLEAGLRTRLDAAAGTATRLHVCVVAGAVPDDLAALWA
LKRIAVAVAEFAEPPAEGETGPRSVFGTGAVHVTLVTRRAFTLPDSPSAPDPRHAALAGA
RRVLLNEQTPLRWRLIDTEPGTPIADLVTELAVPGAFSYDNCDEVLLRAGTRWAPVVTKP
LPDRLAELDTAEPLTDPEANFALDVPRTRLLSQVGWRQCDRPAPGPGEVEVRMQVIGLNY
KDPLKIIGLLGERELAPTYFGTVPGMEGVGTVVRVGDGVDDVAVGALVAVAAKGMMRRFA
VVDRQLVVALPADTDPGHCTSTIAFGTAEYALLDLAKLQPGETVLIHGAAGGVGTAAIQV
AKAQGARIIGTASTPERRAHILAAGADHAVNSRSLNFVDDVLALTGGAGAEVIVSSAPGE
ILRQNFHAAAEFGRIVEVGKADIYTGGLLELAVFDKNLAYYSMDLDRLVAVRPQRLARLL
ERVFEKVTEGTYTPLPYQLFGTEEVGKAFEETLRSSRPARIAVRVDTPEPAVRPQLPDVE
IDSAATYLITGGFGGFGLAIGRWLTLRGARRLVLVGRRGATTDAARDQLAAWRTLGVEVI
EELADIADDAAVAGVVARAHGAEHPLRGVFHAAGAVADNNIGKMTFDQLDLVYRPKVHGA
RLVHDAIRDAGITLDMFVLCSSGGSMYGIYGQYNYCAANLAVEALAEEWTRAGERALCVG
WGHLSGATGGMAADETAEKYLDLVGFGPIDMADATAYLEQTLRLGAIRAAIIPTDWAKLT
GTFPQLTRTGRTVALAKAAAKDTSELARLRAELAAMDDTKRGPYIARKMADELAVVMGVP
VESIDMTIPVPELGLDSLMAVELGARVTKTLGIDLMSLQMGRSFSLEQAGPKVAELVLAS
EPAAAQPLPDPSHTEPDDPAAAVGEASMALAR
NT seq
6399 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatattgccatcgtagggatcgggtgccgattcgcgggcggcatcgattcaccg
gaatctttctgggatttcgtcgtcgacaaacgggacggcgtcgtcgatattccggcggac
cggtgggattaccgccgctactacgatccggaaccacgcaccccaggccgcgcctacacc
aaacgtggcgccttcctgaccaccgatccgtgggagttcgaccccgatttcttcggcatc
tccccgcgcgaggccacggtgctcgacccgcagcagcggctgctgctcgaggtcacctgg
gaggcgctcgacgacgcgggcatcgccggcggcgcggcgggcgcgcaggtgggggtgtac
gtcggcgggttcgtcgtggaccagtcggtgatcggggtggtggggcccgcgctgttccac
accgacatgcacaccccggccagcgcctcctacaccatgctgtcgaaccggatcgcctac
gcgctcaacctggtcggccccgccatcaccgtcgacaccgcgtgctcgtcctcgctggtc
gcgttccacctggcctgccaggcgctggcgaacgacgactgccgggtggcgctggcgggc
ggggtcaacgtgatgttgcagccggagaccttcgtcctgatgtgcaagggcggtttcctg
gccaccgacggccgctgcaagtccttcgacgccgccgccgacggttacggccgcggcgag
ggcgcgggcatggtggcgctcaagcggctcgacgacgcggtggccgacggcgaccggatc
tacgcggtcgtcaaggccaccggctcgaaccaggacggccgcaccaccgccatcaccgtg
cccaacgccgactcccaggaagcgctggcccgcaccgtgtgcgcccgctcgggcctggcc
ccgagcgcgatcacctacctggaggcgcacggcaccggcaccctcgtcggcgatccggtc
gaattgcgcgcgctgggaagggttttcggcgccgcgtcgggacggatcggctccgtggga
gtcggttcggtgaaggcgaccatcgggcacaccgaggcggcggccggggtggcgagcgtg
atcaaggccgcgctcgcgatcagccaccgcaccctgccgccgcagggctggctcgacacc
ccgaacccggacatccccttcgccgatctcggcctgcacgtccagaccgcggccgaaccg
ctggccgccgacgccggaccgatgtcggtggcggtcaacggattcggctacggcggcacc
aacgcgcacgccatcctcgccgagttcaccgggcagcaggcaccgtccgcgccgcaccgg
cacctcggcatcctgcccatctcggcgcgcggcaccggggcggcgcgggcgctggcgggc
cgcttcgccgatctcctcaccgcgggcgccgacccggaccacctggccgaggccgcctgg
acccggatggcgcaccatccgttccgcaccggcgtgctgctcggggacagcaccgaggac
ctgatccgtgacctgcgcggctacgcggcgggggagggccgcgacgcggcgcgcaccgtg
gtctccgcggcggccgagccggtgttcgtgttctcggggatgggcccgcagcactggcgg
atgggccgggacctgctcggcgcgggcggggtgttcgccgagaccgcgcaccggatcgac
gcggagttccgcgccgtcgccggctggtcgatcatcgccgaactgctgcgcccggaagcc
gaatcccgtatcggcagaaccgaagtcgcccagccggccaacttcctgatccaggtgggg
ctggtcgccgaactcgccgagtacggcatcacccccgccgccgtcgtcgggcacagcgtc
ggcgaggtgtcggccgcctatgtcagcggcatgctgacgctgcgggacgcggtccgggtg
gcctaccaccgcgcccgcctgcaggcgagcaccgcggggaccggcggcatgctcgcggtc
ggcaccccgccggaccaggccgaggcgctggtcgccggcgatccgcacgtcgacatcgcc
gccgtgaacagcccggccgcggtcaccctgtccggtgcggtcgaccggctcgacgacctg
gccgaaaggctcaccgaggacggcgttttcgcgcgcaggctgcgcgtcgaggtgccctac
cacagccggctgatggacccgatcgaagacgaactgcgcgcggtgctggccgatctcacg
ccgcgacagcccaccgtgccgctgtactcgacggtgaccggcgagttggtcaccgagggc
gactgggacgcggagtactggtggtccaatgtgcgccagcccgtgcggttcgccgccgcc
gtcgggcgcctgctcgccgcgggcagccgggtcatcgtggaggtcggtccgcatccggtg
ttgtcgggcaatatccgcgaggcgctggtcgacgccgacgtcgtcgggaccaccgtcccc
accctggaccgtgagcaggccgaccaggacagcctgcggcgcaccctcatcgggctgcac
gccgccggtgtgctggatcgcgcggcgctgttccccgccgaccggccggtgaccccgcat
ctgccgctgccgcgctacccctggcagcggacccgcctgcacgccgcgctgccgctgttc
gagcaggcccgcctcggcacgcccgacgggtacgcgatgctgggcgaccccgatgtggag
ggcaggccggaatggctgctccaggtcggcaccgaactgctgccgtggctggccgaccat
gtcgtcaacggggtcaagatcatgccgggcgcggcctacctcgacgccgccctcagcgcc
accgcgtcccggctgggcgtgaaacaggtcgcgctggaacaggtccggttcgtcgcgccg
ctgatcatgggcgcgcccgatgtgccgctcgtggcgctgagcatcgaggaggccagcgga
cgtttcctgctgcgctcgcgcagcgcgaccgggacggcgtggacggtgcacgcttcgggg
cgcaccctgaccggcggttacgaacagacgaccgtggcggtgcccgagatcgaggtgggc
atcgacgtcgatccggagctgttctacgccgggctggccgcggcgggcctgcagtacggc
ccgtcgttccgccgggtgacctcggtgcgcgtcggcgcggacgtggtggtggcgaccgtc
gacggcggcatcgccgcgggctccgggcatctggcccaccccgccgtcgtcgacgcggcc
atgcagtgcgcggccatgctgttcgccgacgaccgcatcaccgagggcgtgatggtgccg
gtcggggtggccgccgtgcgcctgctcgccgagctgcccgagaccgtcacggtcgtcgcc
cgccgcgacgtcggcgcgcgcctgcgcgccgacgtcgatctgctcgacggcgaccggcgc
ctgatcgcccggctgaccggcctgcagatcggcgcgctgaaacccggcgacgatccgctg
caccggatggccgacttctactacgccgacacgatgaccgaactcgaaccgatcgacctc
gcggcgctcaccgacgccggcccggcggcgacggtcgtcgtggagctcggcgacaccgag
accgccgtcgaactggccgcggccatccccggcgcgcaggtgtacgtcgcgcacccggag
gaccccgacctcgaagccggactgcgaacccggctggacgcggccgcgggcacggcgacg
cggctgcacgtctgtgtggtcgccggcgcggtgcccgacgatctcgccgccctgtgggcg
ctcaagcggatcgccgtcgcggtggcggaattcgccgaaccgcccgccgagggcgagacc
ggcccgcgctcggtgttcggcaccggcgccgtccacgtcaccctggtgacccgccgcgcc
ttcaccctgcccgacagcccgagcgcgcccgacccgcggcacgccgcgctggccggtgcc
cgccgggtcctgctcaacgagcagacaccgctgcggtggcggctgatcgacaccgaaccc
ggcaccccgatcgccgacctcgtcaccgaactcgcggtacccggcgcgttctcctacgac
aactgcgacgaagtgctgctgcgcgccgggacacgatgggcgccggtggtgaccaagccg
ctgcccgaccggctcgcggaactcgacaccgccgagccgctcaccgaccccgaggcgaac
ttcgccctcgacgtgccgcgcacccgcctgctctcgcaggtggggtggcggcagtgtgat
cgcccggcgccgggacccggcgaggtcgaggtccgaatgcaggtcatcgggctgaactac
aaggacccgctcaagatcatcggattgctcggcgaacgcgaactcgcgccgacctacttc
ggcaccgttccgggcatggagggcgtcggcaccgtcgtgcgggtgggtgacggcgtcgac
gacgtcgcggtgggcgcgctggtcgcggtggcggccaagggcatgatgcgccgcttcgcc
gtggtcgaccgtcagctcgtcgtcgccctgcccgcggacaccgatcccggccactgcacc
agcaccatcgccttcggcaccgcggagtacgcgctgctggacctggccaagctgcaaccg
ggggagaccgtgctcatccacggcgcggcgggcggggtcggtacggcggccatccaggtg
gccaaggcgcagggcgcgcgcatcatcggcaccgcgagcaccccggaacgccgggcgcac
atcctggccgccggtgccgatcacgcggtgaactcgcgctcgctcaacttcgtcgacgac
gtgctggcactgaccggcggcgccggcgccgaggtgatcgtcagcagcgcgccgggggag
atcctgcgccagaacttccacgccgccgccgaattcgggcgcatcgtcgaggtcggcaag
gccgacatctacaccggcggcctgctggaactggccgtgttcgacaagaacctggcctac
tactcgatggacctggaccggctggtcgccgtgcggccgcagcgcctggcccggctgctg
gagcgggtgttcgagaaggtcaccgagggcacctacaccccgctgccgtaccagctgttc
ggcaccgaggaggtgggcaaggcgttcgaggagacgctgcgctcctcgcggcccgcccgc
atcgccgtccgggtggacacccccgaacccgcggtgcggccgcagctgcccgacgtcgag
atcgacagcgccgcgacctatctgatcaccggtgggttcggtgggttcggcctggccatc
ggccgctggctgaccctgcgcggtgcgcgcagactggtgctggtcgggcggcgcggcgcg
accaccgacgccgcccgcgaccagctggccgcctggcggaccctcggcgtcgaggtgatc
gaggaactcgccgacatcgccgacgacgccgccgtggccggggtggtggccagagcgcac
ggtgccgagcacccgctgcgcggggtcttccacgcggcgggcgcggtggccgacaacaac
atcggcaagatgacgttcgaccagctcgacctcgtctatcggccgaaggtccacggcgcg
cggctggtgcacgacgcgatccgcgacgcgggcatcaccctggacatgttcgtcctgtgc
tcctccggcggctcgatgtacggcatctacggccagtacaactactgcgcggccaatctc
gccgtcgaggccctcgccgaggagtggaccagggcgggggagcgggcgctgtgtgtcggc
tggggacacctgtccggcgcgaccggtggcatggccgccgacgagaccgccgagaaatac
ctcgacctggtgggcttcgggccgatcgacatggccgacgccaccgcctatctggagcag
accctgcgcctcggcgccatccgcgccgccatcatccccaccgactgggccaagctcacc
ggcaccttcccccagctcacccgtaccggccgcaccgtcgccctggccaaggcggccgcc
aaggacacctccgaactcgcccggctccgcgcggaactggccgccatggacgacaccaag
cgcggcccgtacatcgcccgcaagatggccgacgaactggcggtggtgatgggcgtgccg
gtggaatccatcgacatgacgatcccggtgcccgaactgggcctggactcgctgatggcg
gtggaactgggcgcccgggtcaccaagaccctcggcatcgatctgatgtcgctgcagatg
ggccgctcgttcagcctggaacaggccgggccgaaggtcgccgaactcgtgctcgcctcc
gaaccggctgccgcccagccacttccggacccgtcgcacaccgagccggacgacccggcg
gcagcggtgggcgaggcgtcgatggcgctggcgcgctga
DBGET
integrated database retrieval system