Nocardia asteroides: NCTC11293_03271
Help
Entry
NCTC11293_03271 CDS
T06742
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nad
Nocardia asteroides
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nad03032
]
NCTC11293_03271
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_03271
Enzymes [BR:
nad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC11293_03271
DNA replication proteins [BR:
nad03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11293_03271
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11293_03271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
VEG34936
LinkDB
All DBs
Position
1:3449529..3450173
Genome browser
AA seq
214 aa
AA seq
DB search
MRLRRSVVSGPGIRRRARGRGFSYTGTRGVATLLRTHVRVTGEELWFDYRAKGGARRRVR
IGDELLAAAVRGLLRSHATSRRLLVYRRGGEYRELHAADINARFQELADCECSAKDLRTW
QATVPAAEGFAQRDPPSSRRAAAAAGREVAAEVAAALGNTPAVARGSYIDPRVIEAFADG
ETVARAVARAARAGSDEERRQLVDRAVIRLLRRR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgcgccgcagcgtggtgtccgggccgggaatccgccgccgggcgcgtggtcgc
gggttctcctacaccggcacccgcggcgtcgcgaccctgctgcgcacccacgtgcgggtg
acgggcgaggaactgtggttcgactaccgggccaagggcggcgcccggcgacgcgtccgg
atcggcgacgaactgctcgcggccgcggtccgcggcctgctgcgcagccacgcgacctcg
cgacgtctgctggtctaccgcaggggcggcgagtaccgggagctgcacgccgccgatatc
aacgcccgcttccaggagctcgccgactgcgagtgcagcgccaaggacctgcgcacctgg
caggccaccgtgccggccgccgaggggttcgcgcagcgcgacccgccgagctcacgccgc
gcggcggcagccgccggacgcgaggtggcggccgaggtcgccgcggccctgggcaacacc
ccggctgtcgcccgcggctcctacatcgacccgcgcgtgatcgaggcgttcgccgacggc
gagacggtggccagggcggtggcgcgggccgcgcgggcaggctccgacgaggaacgcagg
cagctcgtcgaccgcgcggtcatccggttgctgcggcgccggtga
DBGET
integrated database retrieval system
