Nocardia asteroides: NCTC11293_03405
Help
Entry
NCTC11293_03405 CDS
T06742
Name
(GenBank) carbohydrate diacid transcriptional activator CdaR
Organism
nad
Nocardia asteroides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
GGDEF_2
HTH_20
HTH_23
HTH_8
Sigma70_r4_2
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
VEG35070
LinkDB
All DBs
Position
1:complement(3568848..3570041)
Genome browser
AA seq
397 aa
AA seq
DB search
MHATSLPSSVSSLAAQLSTVVEPMTVELVRRIIATDPSYAGAGLLTEEQLRSTCLDNLTA
IVGLLSGTQPLLLQSAREAGRIKAEQGIPVAALLHAYRLGGRLIWEELTARSAGPGDVRL
HELATRLWEVIDLYSDAAVESYRETEVDLARADEQAQSRLIRTLFDDHSHSPGRILDVLR
GLGLPDGGTFTVVTVDAQPAAVPTPTLSGALRTLGIRSAWDVRIDGVVGLMVAPAPSTMD
RAGEVLSSIVAERVGLSTPFTTPHGIAAAVAESRQACRSIPPGSGGVVRFGERPVAHLLV
TVPDAARRAATQILGPVLMLPPTERADLIAVLDAWYRCGGSAAAVAETLHCHRNTVRYRL
RKIRDLTGRDTTDPRQSAELYLALGAITLLETPAPQA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccacctcgttgccgtcctcggtctcctcgctcgccgcgcagctgtccacggtg
gtcgagccgatgaccgtcgagctcgtgcggcgcatcatcgccacggatccttcctacgcc
ggggcgggcctgctcaccgaggaacagctgcgtagcacctgcctcgacaatctcaccgcc
atcgtcggactgctgtccggaacgcagccgctgctgttgcagtccgcgcgcgaggccggg
cggatcaaagccgagcagggcattcccgtcgccgcgctcctgcacgcctaccggctgggc
ggccggctcatctgggaggagctgaccgcgcgctccgccggaccgggtgatgtgcgcctg
cacgaactggccacccggctgtgggaggtgatcgacctctactcggacgcggcggtggag
tcctaccgcgagaccgaggtggacctggcccgtgccgacgaacaggcccagagccggctg
atccgcaccctcttcgacgaccactcgcacagtcccggccggatcctggatgtcttgcgc
ggcctcggcctgcccgacggtggcaccttcacggtggtgaccgtcgacgcccagcccgcc
gcggtgccgacgcccaccctcagcggcgcgctgcgcacccttggtatccggtcggcatgg
gatgtgcggatcgacggcgtggtggggctgatggtcgcgcccgccccgtcgacgatggac
cgcgcgggcgaggtgctgtcctcgatcgtcgccgagcgggtcggtctcagtacgccgttc
accacgccgcacggcatcgccgccgccgtcgccgagtcccggcaggcctgtcgctcgatt
ccacccggttcgggcggtgtggtccgcttcggcgaacgcccggtcgcccatctgctggtc
acggttccggacgccgcccgccgtgccgccacccagatcctggggccggtcctgatgctg
cccccgaccgagcgcgccgatctgatcgccgtcctcgacgcctggtaccgctgcggtggg
tccgcggccgccgtggccgaaaccttgcactgccaccgcaacaccgtccgctaccgcctc
cgcaagatccgcgacctcaccggccgcgacaccaccgacccccgtcaatccgcggaactg
tatctggccctcggcgccatcaccctgctcgaaacacctgccccgcaggcgtga
DBGET
integrated database retrieval system
