Nocardia asteroides: NCTC11293_03932
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Entry
NCTC11293_03932 CDS
T06742
Symbol
uvrA_2
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
nad
Nocardia asteroides
Pathway
nad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11293_03932 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_03932 (uvrA_2)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11293_03932 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC11293_03932 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
SMC_N
nSTAND1
DnaJ_CXXCXGXG
Anti-TRAP
AAA_16
AAA_23
NACHT
DUF815
Bact_hydrolase
DUF5351
Motif
Other DBs
NCBI-ProteinID:
VEG35593
LinkDB
All DBs
Position
1:4146173..4148578
Genome browser
AA seq
801 aa
AA seq
DB search
MRGARVHNLRDVDVDMPRNALVAFTGVSGSGKSSLAFGTLYAESQRRYLESVAPYARRLL
HQIEAPDVDEVTGLPPTVVLAQRRSAPSSRSTVGTVTAISNSLRLLMSREGDYPDGPARS
GPGHYPEGTNRLYSDAFSPNTVEGACPRCHGQGVVHEATEASMVPDPSLTIRDGAIASWP
GAWQGKNLRDVLAALGYDIDRPWRELAPAAREWILFTDDRPVVTVEPEREPHRIHRPYQG
TYTSAERLLLRAHAESKSEATRARAAEYLHTTTCPLCAGRRLKPEALAVTFAGYNITELA
ELPLAELGAVLRPYTAGTSAAAVLTQDLLSRIEVLVELGLGYLSVDRESPTLSGGELQRL
RLAGQLRSGLFGVVYILDEPSAGLHPADTAALTTVLGRLKDSGNSVFLVEHDLDVVRHAD
WLIDIGPGAGVHGGQVLYSGAVEGLRAVPASVTRPYLFDEIARPVRVDRAPGGVLALREV
SAHNLRDLDLDVPLGVFTAITGVSGSGKSSLLHAISVTAAADPAIVRVVEVDQAPIGRTP
RSNLATYTGLFDTVRKLFAATDAAAARGYGVGRFSFNVAEGRCPTCQGEGYITVELLFLP
STYSPCPDCHGARYNPETLEITYRDTTIAGVLDMTVDRAAEFLADVPAVARALRTLAEVG
LGYLRLGQPATELSGGEAQRVKLATELQRARRAGTLYLLDEPTTGLHPADTDILLTQLNS
LVDGGATVVVVEHDMTVVAQADHVVDLGPGGGAQGGRIVAQGSPAQVAADSGSRTAPYLA
ERMTARPGKSSAIAGGGPIVG
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
gtgcggggcgcccgggtgcacaatctgcgtgatgtcgacgtcgatatgccccgcaacgcg
ctggtcgccttcaccggggtctcgggttcgggcaagtcgtcgctggccttcggcacgttg
tacgcggaatcgcagcgccgctacctggagtcggtcgcaccgtatgcccgacggttgctg
catcagatcgaagcgcccgatgtggacgaggtgaccgggctgccgccgacggtggtgctc
gcgcagcgaaggtccgcgccgtcgtcgcggtcgacggtcgggacggtcaccgcgatctcg
aactcgctgcggctgctgatgtcccgggaaggcgactacccggacggcccggccagatcg
ggaccgggacattatcccgagggcacgaatcggctgtactccgacgcgttctcacccaac
accgtggagggcgcgtgcccgcgctgccacgggcagggcgtggtccatgaggcgaccgag
gcgtcgatggtgccggacccgtcgctgaccattcgcgacggggcgatcgcgtcgtggccg
ggcgcttggcagggcaagaacctgcgcgatgtgctggccgcgctgggctacgacatcgac
cggccgtggcgggaactggccccggccgcgcgcgagtggatcctgttcaccgacgacagg
ccggtcgtcaccgtggaacccgagcgggaaccacaccgcatccaccggccctaccagggc
acctacaccagcgccgagcggctgctgctgcgggcgcacgcggaatccaagagcgaggcc
acccgggcgcgggcggccgagtatctgcacaccacgacctgtccgctgtgcgcggggcgc
aggctcaaacccgaagcgctggcggtgaccttcgccggctacaacatcaccgagctcgcc
gagttgccgttggccgagctcggtgctgtgttgcggccctataccgcgggcacgagcgcg
gccgcggtgctcacccaggacctcctctcccggatcgaggtgctggtcgagctggggctc
ggctatctcagcgtcgaccgggagagcccgaccctgtcgggtggggagttgcagcgcctg
cggttggccggtcagctgcggtcgggcctgttcggggtggtctacatcctcgacgagccc
tcggccggactgcatcccgccgacaccgcggcgctgaccacggtgctgggccggctcaag
gactcgggcaacagtgtgttcctcgtcgaacacgatctggacgtggtccgccacgccgac
tggctcatcgacatcggacccggcgcgggcgtccacggcggacaggtcctctacagcggg
gcggtcgagggcctgcgcgcggtgccagcctcggtgacgcggccctacctgttcgacgag
atcgctcgaccggtgcgcgtcgatcgggcacccggcggtgtcctggcgctgcgcgaggtg
agcgcgcacaatctgcgcgacctcgacctggacgtcccgctcggtgtgttcaccgcgatc
accggggtgtccggatcggggaaatcgagtctgctgcacgcgatctcggtgaccgcggcg
gccgacccggcgatcgtgcgtgtcgtggaggtcgaccaggccccgatcgggcgcaccccg
cgctcgaatctggccacctacaccggcctgttcgacaccgtgcgcaaactcttcgccgcg
accgacgccgccgcggcgcgcggttacggggtgggccggttctcgttcaatgtcgcggag
ggacgctgcccgacctgtcagggcgagggctacatcacggtggaactgctgttcctgccc
agcacctacagtccgtgcccggactgccacggcgcccgctacaaccccgaaaccctcgag
atcacctaccgcgacaccacgatcgccggcgtgctcgacatgaccgtcgaccgggccgcg
gagtttctcgccgacgtccccgccgtcgcccgcgcgctacggaccctcgccgaggtcggc
ctgggctatctgcggttggggcaaccggccaccgaactgtcgggcggggaagcgcagcgg
gtgaagctggccaccgaactgcagcgggcccggcgcgcgggcaccctctacctgctcgac
gagcccaccaccggtctgcaccccgccgacaccgacatcctgctgactcagctgaattcg
ctggtcgacggtggcgccaccgtcgtggtggtcgagcacgacatgaccgtcgtcgcgcag
gccgaccacgtcgtcgacctggggcccggtggcggcgcgcagggtgggcggatcgtcgcg
cagggcagcccggcccaggtcgcggccgattccggcagccggaccgcgccgtatctggcg
gagcggatgacggcgcgcccgggcaaatcatcggctatcgccggtggcgggcctatcgtg
gggtga
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