KEGG   Nocardia asteroides: NCTC11293_04175
Entry
NCTC11293_04175   CDS       T06742                                 
Symbol
sigB_2
Name
(GenBank) Sigma-37
  KO
K03090  RNA polymerase sigma-B factor
Organism
nad  Nocardia asteroides
Brite
KEGG Orthology (KO) [BR:nad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nad03021]
    NCTC11293_04175 (sigB_2)
Transcription machinery [BR:nad03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC11293_04175 (sigB_2)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r4_2 HTH_Crp_2 Sigma70_ECF MarR HTH_24 MarR_2 HTH_11 HTH_5 HTH_20 HTH_3 DUF7343 HTH_1 HTH_IclR HTH_8 HTH_23 HTH_AsnC-type DUF6976 GerE
Other DBs
NCBI-ProteinID: VEG35836
LinkDB
Position
1:4406269..4407078
AA seq 269 aa
MSHNAVHPTDLPTYEHPEPLFAHWSLTDPQSPEHQELRELIIQTCLPLAENIAKRFANRG
EAFDDLLQTARVGLVVAVDRYNVGQGAPFLGFAIPTVMGEVRRHFRDRTWALHVPRRDKE
LSVRLAPATEKLTRELDRSPTAYELADELGVEITDITRAMTAVEAHHTRSLDTPSQDAED
GPRMSIADSVGDEDPLFEFTEDALTVAPLLAQLSDAERQLLTWRFFDSLTQSEIAERLGM
SQMSVSRKLSALLDRLHDQAAVEPEIRIA
NT seq 810 nt   +upstreamnt  +downstreamnt
atgtcccacaacgccgttcaccccaccgacctaccgacctacgaacaccccgaaccgctg
ttcgcgcactggtccctgaccgatccgcagtcgcccgagcaccaggagctgcgcgaactg
atcatccagacctgcctgccgctggcggagaacatcgccaagcgcttcgccaaccgtggc
gaagccttcgacgatctgctgcagacggcccgggtcgggctggtcgtcgcggtcgaccgc
tacaacgtcgggcagggcgccccgttcctcggtttcgccatcccgacggtcatgggcgag
gtgcgcaggcacttccgggaccgcacctgggccctgcacgtgccgcggcgcgacaaggag
ctgtcggtgcgcctggccccggccaccgagaagctgacccgcgagctggaccgctccccg
accgcctacgagctggccgacgagctcggtgtcgagatcaccgacatcacccgcgcgatg
accgccgtcgaggcgcaccacacccgcagcctcgacaccccgagccaggacgccgaggac
gggccgcggatgtcgatcgccgacagtgtcggcgacgaggacccgctgttcgagttcacc
gaggacgcgctcaccgtcgccccgctgctcgcgcagctgtccgacgccgagcggcagctg
ctgacgtggcggttcttcgactcgctgacccagtccgagatcgccgagcggctcggcatg
tcgcagatgagcgtgtcccgcaaactgtcggcactgctcgaccgcctgcacgaccaggcc
gccgtcgagccggagatccgcatcgcctga

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