Nocardia asteroides: NCTC11293_04566
Help
Entry
NCTC11293_04566 CDS
T06742
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nad
Nocardia asteroides
Pathway
nad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC11293_04566 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_04566 (recB)
Enzymes [BR:
nad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC11293_04566 (recB)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11293_04566 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PDDEXK_1
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEG36223
LinkDB
All DBs
Position
1:complement(4830602..4833967)
Genome browser
AA seq
1121 aa
AA seq
DB search
MTETVAAPAAFDATGPLPAGTTVLEASAGTGKTHAIVGLAVRYVAEAGIGITELLLVTFS
RAATQELRERTRDRFVAVAAALADPEVARAHPDELVRALADTDPATLRLRRHRLLTALAD
FDAGTIATTHSFCQRMLDELGLAGEHDPGARLVESVDELVATVADDLYLARYARDRPPFT
LREARTLALAAVHDRHAELAPRTDGAAGERVAFATAVRAETERRKRRAGLRDFDDLLVLL
HEVLSDPEHGARACARIRERYRVALVDEFQDTDPLQWDILRRAFHDHATLVLVGDPKQAI
YAFRGAEVLSYLDAVAVADRRSELTRNWRSDAGLLRALDHLCGGAELGHPEISVYPVTPT
RPATRLHGDPAIVTPLRLRVLPRTGAGPRNRSGFPSVGRQRAKVADDLAADIVALLESGA
TIEAGPERGAGRPLTEVGDGRPRRPIGPGDIAVLVRTRTQIDVIRAALDRVGVASVLAGG
TSVFATVAATDWLWVLRALEQPHRGDRVRLAACTPILGVTAAEIDTGGADLVGRISTQLR
EAARLFGRAGFAAVFDKLATETDLAPRLLAVENGERELTDLRHLAQLLDEVAVAEGLGLT
ALTRWLADRVRDPEAGSVSGRSRRLDRDAAAVQIATVHASKGLEFPLVYLPFAWDSAKNP
YPATLLFHDDAGARVLDIGGKEAPGYSERQLRCEAEESGEELRLLYVALTRAMCQVVAWW
APAVTTGAAPLHRMLLGRRPGSAQVPRRAEIPADTAAVQRITEWAAPAAEVISVTAVDRP
DDVEPRRVRTELPTGELAAAHFARVLDQQWRRTSYSALTAGAHDATGVTAEEPEDGPGPD
DEPAEAPLDAPVGGTGAPSLMNGLPYGAEFGTLVHGVLEAVDTSAPDLAVEVHARCVEAV
EHTMAELDVDLLSTALLEVLRTPADFGSLAGIAGRDRLPELEFELPLGGGDTPGTHAAGI
HAVAGLLRTHLPADDVLSSYADHLAALPDTVLRGYLTGSIDAVLRVPDGSGEHRYLIVDY
KTNRLGTGDLTVEHYRREHMVAEMIRSHYPLQALLYAVALHRYLRWRLPGYDPARHLGGA
RYLFVRGMIGADTPPGHGVFDWRPPAELVVALSDLLAGGPR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccgtggctgcgcccgccgccttcgacgccaccggtccgctcccggcgggc
accacggtgctcgaggcgagcgcgggcaccggcaagacgcacgcgatcgtcgggctggcc
gtgcgctacgtcgccgaggccggcatcggcatcaccgaactgctgctggtcaccttcagc
cgcgccgctacccaggagctgcgcgaacgcaccagggaccgcttcgtcgccgtggccgcc
gcgctggccgacccggaggtcgcgcgcgcccacccggacgagctggtccgcgccctggcc
gacaccgacccggcgacgctgcggctgcgcaggcaccgattgctcaccgccctggccgat
ttcgacgcgggcaccatcgccaccacccactcgttctgccagcggatgctcgacgaactc
ggcctggcgggggagcacgatccgggcgcgcggctggtggaatcggtcgacgagctggtc
gccaccgtcgccgacgacctctacctggcccgctacgcccgcgaccgcccgccgttcacc
ctgcgcgaggcgcgcaccctcgcgctggccgccgtgcacgaccggcacgccgaactcgct
ccgcgcaccgacggcgccgccggcgagcgggtcgccttcgccaccgccgtgcgcgcggag
accgaacgccgcaaacgccgcgcgggcctgcgcgatttcgacgacctgctggtgctgctg
cacgaggtcctcagcgaccccgagcacggcgcccgcgcctgcgcgcggatccgggagcgc
taccgggtggccctggtcgacgagttccaggacaccgacccgctgcagtgggacatcctg
cgccgcgccttccacgaccacgccaccctggtgctggtcggcgacccgaaacaggccatc
tacgccttccgcggcgccgaggtgctcagctacctcgacgcggtggctgtggcggaccgg
cgcagcgaactcacccgcaactggcgcagcgacgccgggctgctgcgcgcgctcgaccac
ctgtgcggcggtgcggaactgggccatccggaaatcagcgtctacccggtcaccccgacc
cggcccgccacccggctgcacggtgaccccgcgatcgtcacaccgctgcggctgcgggta
ctgccgcgcaccggcgccggaccgcgcaaccggtcgggcttcccgtcggtcggcaggcag
cgtgccaaggtcgccgacgatctggccgccgacatcgtggccctgctggaatccggcgcc
accatcgaggccgggcccgaacgcggcgcgggcaggccgctcaccgaggtcggcgacggc
cgcccgcgcaggccgatcggaccgggcgacatcgcggtcctcgtgcgcacccgcacccag
atcgacgtgatccgcgccgccctggaccgggtgggtgtcgcctcggtgctggcgggcggc
accagcgtgttcgccacggtggccgccaccgactggctgtgggtgctgcgcgcgctcgaa
caaccgcatcgcggcgaccgggtccggctggccgcctgcacgccgatcctcggtgtcacc
gccgccgagatcgacaccgggggcgccgatctggtgggccggatctccacgcagctgcgc
gaggcggcccggctgttcgggcgggccgggttcgccgccgtgttcgacaagctggccacc
gagaccgatctcgcgccgcggctgctcgcggtggagaacggcgaacgcgaactgaccgac
ctgcgtcacctggcccagctgctcgacgaagtcgccgtggccgagggcctcgggctcacc
gcgctcacccgctggctggccgaccgcgtccgcgacccggaggcgggcagcgtcagcggc
cgcagccgccgcctggaccgcgacgccgccgccgtgcagatcgccacggtgcacgccagc
aaggggctcgaattcccgctcgtctacctgccgttcgcgtgggacagcgccaagaacccc
tatccggcgacgctgctgttccacgacgacgccggcgcccgcgtcctcgatatcggcggc
aaggaggcgcccggctacagcgaacgccaattgcggtgcgaggccgaggaatccggcgag
gaactgcggctgctctatgtcgcgctgacccgggccatgtgccaggtggtggcctggtgg
gcgccggcggtcaccaccggcgccgcgcccctgcaccggatgctgctcggccgcagaccc
ggttccgcgcaggtaccgcgccgcgccgagatccccgccgataccgctgccgtgcaacgc
atcaccgagtgggccgccccggccgccgaggtgatctcggtgaccgccgtcgaccgtccc
gacgacgtggaaccgcgccgcgtccgcaccgaactgcccaccggggagctggccgccgcc
cacttcgcccgggtgctcgaccagcagtggcgccgcacctcgtactcggccctcaccgcg
ggcgcccacgacgcgaccggagtgaccgcggaggaacccgaggacggaccagggcccgac
gacgaaccggccgaagcgccgctggacgcccccgtcgggggcacgggcgcgccgtcgctg
atgaacggcctgccctacggcgcggaattcggcaccctggtgcacggcgtgctggaagcg
gtcgacacctcggcgcccgacctggcggtcgaggtccacgcccggtgcgtcgaagcggtc
gagcacaccatggccgaactcgacgtcgacctgctgtccaccgccctgctcgaagtcctg
cgcaccccggccgatttcgggtcgctggccggcatcgccggccgggaccggctgcccgag
ctggaattcgagctgccgctgggcggcggtgacaccccgggcacgcacgccgcgggcatc
cacgccgtcgccggcctgctacgcacccacctgcccgccgacgatgtgctgtccagctac
gccgaccacctcgccgccctgcccgacacggtcctgcgcggctacctcaccggcagcatc
gatgccgtcctgcgggtgcccgacgggagcggggagcaccgctacctgatcgtcgattac
aagaccaaccgcctcggcaccggcgacctcaccgtcgagcactaccggcgcgagcacatg
gtggccgagatgatccggtcgcactatccgctgcaggcgctgctctacgcggtcgcgctg
caccgctacctgcgctggcggctgcccggctacgaccccgcccgtcacctcggcggcgcc
cgctatctgttcgtgcgcggcatgatcggcgcggacaccccgcccgggcacggtgtcttc
gactggcgtccgcccgccgaactcgtcgtcgcgctgtcggatctgctggcagggggacca
cgatga
DBGET
integrated database retrieval system
