Nocardia asteroides: NCTC11293_04878
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Entry
NCTC11293_04878 CDS
T06742
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nad
Nocardia asteroides
Pathway
nad03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCTC11293_04878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_04878
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NCTC11293_04878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
zf-Vps39_C
Motif
Other DBs
NCBI-ProteinID:
VEG36534
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All DBs
Position
1:5172298..5173209
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AA seq
303 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYTATEDHDIRFHQVHAEDGGRIKYDRVCQVCGKSIQYADI
DKAYVSPDGDQVVLTDADFAKLPAAEKHEIPVLEFVPSEQIDPVLFDKSYYLEPDSSTPK
AYQLLAATLERIDKTALVHFTLRQKTRLAALRVREGVLVLQTLLWPDEVRSVDFPALDDA
PTPRPQELKMAETLVESMSGDFDPGEYTDEYQIELQKLLDEAIASGSGKVDTAAAAEPAE
QPDAEVVDLVAALQRSLEASGRREAEPAPKKKAAKKAPAKKAAARKSTASKTTERKSAAR
KGA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgatctggaagggctcgatcgcattcgggctggtcaacgtcccggtcaaggtg
tacaccgcgaccgaggaccacgacatccggttccaccaggtccacgccgaggacgggggc
cggatcaagtacgaccgggtctgccaggtgtgcggcaaatccatccagtacgccgacatc
gacaaggcctacgtctcgcccgacggcgaccaggtggtgctcaccgatgccgacttcgcg
aaactccccgccgcggagaagcacgagatcccggtgctcgagttcgtgccgtccgaacag
atcgacccggtcctgttcgacaagagttactacctcgaaccggattcctcgacgcccaag
gcctaccagttgctggccgccacgctggaacgcatcgacaagaccgcgctggtgcacttc
accctgcggcagaagacgcggctggcggcgttacgggtgcgcgagggcgtgctggtcctg
cagacgctgctgtggccggacgaggtcaggtcggtggacttccccgcgctcgacgacgcg
cccacgccgcgcccgcaggaactgaagatggccgagaccctggtggagtcgatgtcgggc
gacttcgaccccggcgagtacaccgacgaataccagatcgaactgcagaagctgctggac
gaggcgatcgcgagcgggtcgggcaaggtcgacaccgccgccgcggccgaacccgccgaa
cagcccgacgccgaggtcgtcgacctggtcgcggccctgcagcgcagcctcgaggccagc
ggacgccgcgaggccgagcccgccccgaagaagaaggccgcgaagaaggcgccggccaag
aaggccgcggcgcgcaagtcgacggcgagcaaaaccaccgagcgcaagtccgcggcccgc
aagggcgcgtag
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