Nocardia asteroides: NCTC11293_05184
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Entry
NCTC11293_05184 CDS
T06742
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nad
Nocardia asteroides
Pathway
nad00300
Lysine biosynthesis
nad00470
D-Amino acid metabolism
nad01100
Metabolic pathways
nad01110
Biosynthesis of secondary metabolites
nad01120
Microbial metabolism in diverse environments
nad01230
Biosynthesis of amino acids
Module
nad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC11293_05184 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC11293_05184 (dapF)
Enzymes [BR:
nad01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC11293_05184 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
VEG36834
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All DBs
Position
1:complement(5490834..5491742)
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AA seq
302 aa
AA seq
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MDDVSDIEFSKGHGTQNDFVVLPDPQGRLDLTVERVAALCDRQRGLGADGVLRVARAGAL
VAAGVLAELPAGVAETDWFMDYRNADGSIAEMCGNGVRVFAHYLNASGLETRTEYIVGSR
AGARPVVVHVAGPVDGEVTVDMGLVRELGPSTATLGGWALAGIGIDVGNPHLACVDPALT
ADALAKLDLAVSPGFDPDLFPHGVNVEILTALDADNAVDMRVYERGVGETRSCGTGTVAA
AAAALTAAGVSVATGSGEVTVRVPGGRVRVTVDQGRAWLRGPSVLLASGTLSADWWNAQE
TR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtgtccgacatcgaattcagcaagggccacggcacgcagaacgatttcgtc
gtgctgcccgacccgcagggccgcctcgacctgaccgtcgagcgcgtcgcggcgctgtgc
gaccggcagcgcggtctcggcgccgacggcgtgctgcgggtggccagggcgggcgcgctc
gtcgccgccggtgtgctcgccgagctgcccgcgggcgtcgccgaaaccgactggttcatg
gactaccgcaacgccgacggctcgatcgccgagatgtgcggcaacggtgtccgggtgttc
gcgcactacctgaacgcctcgggcctggagacccgcaccgagtacatcgtcggcagccgg
gccggtgcgcggccggtcgtggtgcacgtggcgggcccggtcgacggcgaggtcaccgtc
gacatgggcctcgtgcgcgaactcggcccgtcgaccgcgaccctgggcggctgggccctg
gccggcatcggcatcgatgtcggcaatccgcacctggcctgcgtcgatcccgcgctgacc
gccgacgcgctggccaagctggatctggcggtgtcgcccggcttcgaccccgacctgttc
ccgcacggcgtcaacgtcgagatcctcaccgcgctcgacgccgacaacgccgtggacatg
cgcgtctacgaacgcggcgtcggcgagacccgctcctgcggcaccggcacggtggccgcc
gcggcggccgcgctcaccgcggccggtgtctcggtggcgaccggatccggcgaggtcacg
gtgcgcgtgcccggcggccgcgtgcgggtcaccgtcgaccagggccgggcgtggctgcgc
ggcccgtcggtgctgctggcgagcggcacgctgtcggcggactggtggaacgcgcaggag
acccgataa
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