Nocardia asteroides: NCTC11293_05312
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Entry
NCTC11293_05312 CDS
T06742
Symbol
phnF
Name
(GenBank) HTH-type transcriptional repressor phnF
KO
K03710
GntR family transcriptional regulator
Organism
nad
Nocardia asteroides
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nad03000
]
NCTC11293_05312 (phnF)
Transcription factors [BR:
nad03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC11293_05312 (phnF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
HTH_DeoR
Sigma70_r4
HTH_PafC
DUF977
HTH_24
DUF4423
HTH_36
RepL
Motif
Other DBs
NCBI-ProteinID:
VEG36959
LinkDB
All DBs
Position
1:5644162..5644884
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AA seq
240 aa
AA seq
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MEAPHTTRVPKVFLVRTEIDAILADLGEGDPVPSERELATRFGVARETVRQALRELLVAG
RIRRHGRGTVVSRPKLTQPLSLRSYTEGAISLGRTPGRIVVGWEDIAADGATAADLELEA
GAPVMHLERVLLADGERIGLESTYLPLPRFAGLRDGYDPTTSLYAAIRATGITFAGARER
IETVLAAPREAGLLECTTALPMLLLHRRSVDADGAPIERVRSLYRGDRVAFEARLSPEHA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaagccccgcacacgacgcgcgtcccgaaggtgttcctggttcgcaccgaaatcgac
gccatcctggccgatctcggcgaaggcgatcccgttccgtccgaacgcgagctcgccacc
cgcttcggcgtcgccagggagacggtgcgccaagcgctgcgcgagctactggtggcgggc
cggatccggcgccacggccggggcacggtggtctcccgccccaaactcacccagccactg
tcgctgcgctcctacaccgagggcgcgatcagcctcggccgcacgccgggccgcatcgtt
gtcggctgggaggacatcgccgccgacggggcgacagccgccgacctcgaactcgaagcg
ggcgcgccggtgatgcacctggaacgggtactgctcgccgacggcgaacgcatcggcctg
gagagcacgtatctgccgctgccccgattcgccgggctgcgcgacggctacgaccccacc
acctcgctgtacgccgcgatccgcgccaccggcatcaccttcgccggcgcgcgggaacgc
atcgagacggtgctggcggcgccgagggaagcggggttgctcgaatgcaccaccgcgctg
ccgatgttgctgttgcatcggcgcagtgtcgacgccgacggcgcacccatcgaacgggtg
cggtcgctgtaccggggtgaccgcgtcgccttcgaggcgaggctgtcacccgagcacgcg
tga
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integrated database retrieval system
