Nocardia asteroides: NCTC11293_05400
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Entry
NCTC11293_05400 CDS
T06742
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nad
Nocardia asteroides
Pathway
nad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11293_05400 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_05400 (mutM_1)
Enzymes [BR:
nad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC11293_05400 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11293_05400 (mutM_1)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11293_05400 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
TackOD1
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
VEG37047
LinkDB
All DBs
Position
1:complement(5733863..5734723)
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLAEHAVGRVVDTVTVTHPRAVRRHLGGGADLAARLTGRTIEAARRRG
KYLWLTFDEPGTALVVHLGMSGQMLVQPAGAPVEKHAHIRAALGDGTELRFVDQRTFGGW
ALAELVEIDGTVVPDVVAHIARDPLDPRFDREAVVAAVRAKNTEIKRVLLDQTVVSGIGN
IYADEALWRAGLHGTRVAAELTRPVVRTLLDGVTAVMTEALAVGGTSFDALYVNVNGESG
YFSRSLAAYGRENEPCDRCGSLLIREQFMNRSSFSCPKCQRKPRRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaactgcccgaagtcgaggtggtccggcgcggtctggccgagcacgcggtcggc
cgcgtcgtcgacaccgtcaccgtcacccatccccgggctgtccgcaggcatctcggcggc
ggcgccgatctggccgcccggctgaccgggcgcacgatcgaggccgcgcggcggcgcggc
aaatacctctggctcaccttcgacgagcccggtaccgccctggtcgtccatctcggcatg
agcggccagatgctggtgcagcccgcgggcgcgccggtcgagaagcacgcccacatccgc
gccgccctcggtgacggcaccgagctgcgcttcgtggaccagcgcaccttcggcggctgg
gcgctggccgagctcgtcgagatcgacggcaccgtggtgcccgacgtggtcgcccacatc
gctcgtgacccgctggacccgcgcttcgaccgcgaagccgtggtcgcggcggtgcgggcc
aagaacaccgagatcaagcgcgtgctgctcgatcagacggtggtgtcgggcatcggcaac
atctacgcggacgaggcgctgtggcgggccggcctgcacggcacgcgggtcgcggccgag
ctgacccgccccgtggtgcggaccctgctcgacggcgtcaccgcggtcatgaccgaagcg
ctggccgtcggcggcacgtccttcgacgcgctgtatgtgaacgtgaacggtgaatccggc
tatttctcccggtcactggccgcttacggacgcgagaacgagccgtgcgaccggtgcggc
tcgctgctgatccgcgagcaattcatgaatcgatcgtcgttttcctgcccgaagtgtcag
cggaagccgcgtcgccgctga
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