Nocardia asteroides: NCTC11293_06369
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Entry
NCTC11293_06369 CDS
T06742
Symbol
pcrA_3
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nad
Nocardia asteroides
Pathway
nad03420
Nucleotide excision repair
nad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11293_06369 (pcrA_3)
03430 Mismatch repair
NCTC11293_06369 (pcrA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_06369 (pcrA_3)
Enzymes [BR:
nad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11293_06369 (pcrA_3)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11293_06369 (pcrA_3)
MMR (mismatch excision repair)
Other MMR factors
NCTC11293_06369 (pcrA_3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
VEG38285
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All DBs
Position
1:complement(6814866..6817448)
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AA seq
860 aa
AA seq
DB search
MDITVAPHASAADPSEPAPAELSRRDSGGSGTSGGGLAEAAARHSAEQEQRRKEREQRRA
EETERLLDGLNPQQRAAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAARGVHTGQILAI
TFTNKAAAEMRERVAGLVGPRAASMWVSTFHSSCVRILRMQAALLPGLNSNFSIYDADDS
RRLLTMISRDFDIDTKKYSARLLATAISNLKNELIGPEQAAADAEADETELPALVARVYA
EYQKRLRAANAMDFDDLIGETVALLQNHPQVAEYYRRRFRHVLVDEYQDTNHAQYVLVRE
LVGHHSADAAEESGVEPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDAETILLEQNY
RSTQHILSAANAVISRNEGRREKKLWTDSGEGELITGYVADNEHDEAAFVAKEIDKLVDA
GEANYGDVAVFYRTNNNSRALEEIFIRMGLPYKVVGGVRFYERKEVRDVVAYLRVLENPD
DAVSLRRILNTPRRGIGDRAEACVAVHAEQRDIGFAAALRDAADGKVALLNTRAQRAIAG
FLDLLDEIRAAGQRADSEYPDVGNVVDAVLDRTGYRAELEASDDPQDGARLDNLNELVSV
AREFSSEAFNNAEAAREEGLLPEAGDGEPEPGSLAAFLERVSLVADTDQIPDEGSGVVTM
MTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPTELAEERRLAYVGITRARQRLYLSRAV
VRSGWGQPVSNPESRFLQEIPQHLLDWRRLEPVVSPVQRGRRREDSGGFERDWTRGDGWD
QRPGVRGGTGSRRPAPGGPVKRNNTDLVLAVGDRVSDDKYGLGRVVAADGVGPLATVTID
FGTAGKIRLIPQFSRTIVKL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatatcacggtcgctccccacgcctcagccgccgatcccagcgaacccgcgcccgcg
gaactatcgcgtcgtgacagcggtggttccggcacgtccggcggcggtctggcggaggcg
gcggcccggcacagcgccgagcaggagcagcgccgcaaggagcgcgagcagcgccgggcc
gaggagaccgagcgcctgctcgacgggctcaatccgcagcagcgggccgcggtcgtgcac
gccggttcgccgctgctgatcgtggcgggcgccggctcgggcaagacggccgtgctcacc
cgccgcatcgcctacctgctcgcggcgcgcggcgtgcacaccgggcagatcctggcgatc
accttcaccaacaaggcggccgcggagatgcgcgagcgggtggccgggctggtcggcccg
cgcgcggccagcatgtgggtctccacgttccattccagctgcgtgcggattctgcggatg
caggccgcgctgctgcccggcctgaattcgaatttctccatctacgacgccgacgattcg
cgccggctgctcacgatgatcagccgcgatttcgacatcgacaccaagaagtattcggcg
cgtttgctggcgaccgcgatttccaacttgaagaacgaactcatcggccccgaacaggcc
gccgccgacgccgaggccgacgagaccgaactgcccgcgctggtggcccgcgtctacgcc
gagtatcagaagcggttgcgcgcggccaacgcgatggacttcgacgacctcatcggcgag
acggtcgccctgctgcagaaccacccgcaggtggccgagtactaccggcgccggttccgg
cacgtcctcgtcgacgagtaccaggacaccaaccacgcgcagtacgtgctggtgcgtgaa
ctcgtcggccatcacagtgccgacgccgccgaggaatccggcgtcgagcccagcgaactg
tgcgtcgtcggtgacgccgatcagtcgatctacgccttccgcggcgcgacgatccgcaac
atcgaggaattcgagcgcgatttcccggatgctgaaaccattctgctggaacagaactac
cgctccacccagcacatcctctccgccgccaacgcggtgatctcgcgcaacgaggggcgc
agggagaagaagctgtggaccgattccggtgagggtgaactgatcaccggctatgtcgcc
gacaacgagcacgacgaggcggccttcgtcgccaaggagatcgacaagctcgtcgacgcg
ggcgaggccaactacggcgacgtcgcggtgttctaccgcaccaacaacaactcacgggcg
ctggaagagatcttcatccggatgggcctgccgtacaaggtcgtcggcggcgtgcgcttc
tacgagcgcaaggaggtccgcgatgtggtggcctacctgcgcgtgctggagaaccccgac
gacgcggtgagcctgcgccgcatcctcaacaccccgcgccgcggcatcggcgatcgcgcc
gaggcctgcgtggcggtgcacgccgagcagcgcgacatcggtttcgcggccgcgctgcgc
gacgccgccgacggcaaggtcgccctgctgaacaccagggcccagcgcgccatcgccgga
ttcctcgacctgctcgacgagatccgcgcggccgggcagcgcgccgacagcgaatacccc
gacgtgggcaatgtggtcgacgcggtgctcgaccgcaccggctaccgcgccgagctggaa
gcctccgacgacccgcaggacggcgcccggctcgacaacctcaacgaactggtcagcgtg
gcccgcgaattcagttccgaggccttcaacaacgccgaggccgcgcgcgaggaggggctg
ctgcccgaggcgggcgacggtgagcccgaacccggttcgctggcggccttcctggagcgg
gtgtcgctggtggccgataccgaccagatcccggacgagggctcgggcgtggtcaccatg
atgaccctgcacaccgccaagggcctggagttcccggtggtcttcgtgaccggctgggag
gacgggcagttcccgcacatgcgggcgctgggcgatccgacggagctggccgaggagcgc
aggctcgcgtatgtgggcatcacccgggcgcggcagcggctctacctgtcgcgcgcggtg
gtgcgctcgggctgggggcagccggtgtcgaatccggaatcccgtttcctgcaggagatc
ccgcagcatctgctggattggcgcaggctggagccggtggtgtcgccggtgcagcgcggc
cgcaggcgcgaggacagcggcggtttcgaacgcgactggacccggggcgacggctgggat
cagcgtcccggcgtgcgcggcggcaccgggtcgcgcaggcccgcgcccggcggcccggtc
aagcgcaacaacaccgatctggtactggccgtgggtgatcgggtcagcgacgacaagtac
ggcctgggccgggtggtcgccgccgacggtgtcgggccgctggctaccgtcaccatcgac
ttcggcaccgcgggaaagatccggctgattcctcagttcagccggaccatcgtcaagctc
tag
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