Nocardia asteroides: NCTC11293_06387
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Entry
NCTC11293_06387 CDS
T06742
Symbol
mutM_2
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nad
Nocardia asteroides
Pathway
nad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11293_06387 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nad03400
]
NCTC11293_06387 (mutM_2)
Enzymes [BR:
nad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC11293_06387 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11293_06387 (mutM_2)
DNA repair and recombination proteins [BR:
nad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11293_06387 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
C2c1_helical
Ribosomal_S13
Caveolin
Motif
Other DBs
NCBI-ProteinID:
VEG38321
LinkDB
All DBs
Position
1:complement(6835801..6836670)
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AA seq
289 aa
AA seq
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MPELPEVEALAQFLRDHAVGAVVGRVDVAALSAVKTFDPPVTALSGRDVTGANRWGKFLG
MDCGGLWLITHLSRGGWLRWVDEPNPLPPKPGGKSPLALRVHFFTPEGATPAIDLTEAGT
KKRLAVYIVDDPKAVPGIARLGPDALAVTEDEFAALLRGTSQRIKTALVDQTLLAGIGNA
YSDEILHTAKISPFANTKTMPAETVSQLYAAMREVLLDAVARSVGQDAARLKGEKRSGMR
VHARTGEKCPVCGDVVREVSYAERSFQYCATCQTGGKVLADRRMSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctacccgaggtagaggcgctggcgcagttcctgcgggaccacgcggtcggc
gcggtggtggggcgtgtcgacgtggcggcgctgagcgcggtgaagacgttcgacccgccc
gtcacggcgctgtccggacgcgatgtcaccggcgcgaaccggtggggcaagttcctgggc
atggactgcggcgggctgtggctgatcacccatctctcgcgtggcggctggctgcgctgg
gtggacgaaccgaatccgctgccgccgaaaccgggcggcaagtcgccgctggcgctgcgg
gtgcacttcttcacccccgagggcgccacgccggcgatcgacctcaccgaggcgggaacg
aagaagcggctggccgtctacatcgtcgacgatccgaaggcggtgcccggtatcgcgcgg
ctcgggccggacgcgctggcggtgaccgaggacgagttcgccgcgttgctgcgcggcacc
tcgcagcggatcaagaccgcgctggtggaccagaccctgctcgccggaatcggcaacgcc
tactccgacgagatactgcacaccgccaagatctcgcccttcgccaatacgaaaaccatg
ccggcggagaccgtttcgcagctgtacgcggcgatgcgggaggtcctgctcgacgcggtg
gcgcgctcggtcggccaggacgcggcccggctcaagggcgagaagcgatccgggatgcgc
gtccacgcgcgcaccggcgagaagtgcccggtgtgcggtgacgtggtgcgcgaggtgtcc
tacgccgagcgctcgttccagtactgcgccacctgccagaccggcggcaaggtgctcgcg
gaccggcggatgtcgcggttgctcaagtag
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