Neomicrococcus aestuarii: BHE16_00120
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Entry
BHE16_00120 CDS
T04559
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nae
Neomicrococcus aestuarii
Pathway
nae03420
Nucleotide excision repair
nae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHE16_00120
03430 Mismatch repair
BHE16_00120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nae03400
]
BHE16_00120
Enzymes [BR:
nae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHE16_00120
DNA repair and recombination proteins [BR:
nae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHE16_00120
MMR (mismatch excision repair)
Other MMR factors
BHE16_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Birna_VP4
Motif
Other DBs
NCBI-ProteinID:
APF39685
UniProt:
A0A1L2ZJW8
LinkDB
All DBs
Position
25324..28740
Genome browser
AA seq
1138 aa
AA seq
DB search
MNNQPLVNEASVKYSPHELAAVLNQYRGKQIFPTEDQARIIESPLEPLLVVAGAGSGKTA
TMADRVVWIVANGFAKPEEILGVTFTRKAAGELTARINAQLDMLRRAGIGPMEDTPVPPS
ISTYHSYAGDLVKDYGLRLGVEPDARLLGEAEAWQIAHRIVRNYSGNLESVENSNASTLT
QAVLKFSGELAEHQVSQEQARDYLKSLRLQLEALPLGRKKRIAADTKLLGKLLEREIVAE
LVGAYQRYKHEHDLLDFGDLIAIAADIAERVPVARQTERDRFKVVLLDEFQDTSHAQMVL
FSKIFGDGHPVTAVGDPNQSIYGFRGASAGQLNEFPLQFPLVQPDGNRERAKVAYLTTAW
RNSRTVLSAANQVAAPLLTASMSDGRSVPLKKLTESPVATEGRVHLAFVETEVAEARLIA
EQLDLELRPGLEGKEPLKSAAVLSRTKAGFAAIADALDERGLPNETTGLGGLLDAPEVGV
IVSTLQVISNPHRPDHLWRLLAGARWRLGAADLIALNDWSRELERRRSPRQAVADDADTP
LFATELLESASLIEAIEELPRTDWVSSRSGRTLSSAARERLLALSAELKSLRRHAHDDLG
DLVRLVERTTNLDIELDAKPGVNHHSARKQLDAFFDVVDEFVRAADRPRLQEFLDWVDAA
AEHENGLDLAPDEPKPGTIQILTVHSSKGLEWDVVAVPSMTAKKFPSMSNSSRWTVGSSA
LPWELRGDHRSLPQWRTDGETLKEVVDAEKAYAEDEKEHRENEERRLAYVALTRAKDLLL
CTAAAYYGAAVKPHEPSPFLLDVKELSDNTLSESSDATSVRVLGWLEEDEIPADNPEAGR
ESAAAWPFDPLAGPTVTERGPQLEEPIVKEPLNSRRPALTTLAGLVRDGFEPWETLRTQP
GSDPSSLMQSDLGKDLLQETLAVLTRRMELSGSRAIHSVGVPKHLSPSMLVEAASNAEAA
QRQYLRPVPSRPSKEAHLGNLFHEWVERFYKTPVLLDLEDVMPASDEESLQQLEVLKDKF
RASEWSSKQAEEVEVPFDQLVAGVPVRGRIDAVFKHGDTFEIVDWKTGHVPSGQDRENKK
VQLSMYRLAFARSRGVDPEKVSAAFYYVNHGQTLRFTEFHSEAELEALIDTYRSASTN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaaccactcgtcaacgaagcatcagtgaaatactcgcctcacgagctcgcc
gccgtgttgaatcagtaccgcggcaaacagattttccctacggaagatcaggcgcggatc
attgagagtccgctcgaaccgctcttggtggtcgccggcgcgggttccggaaagactgcg
accatggctgaccgcgtggtgtggatcgttgccaatggcttcgccaagccggaagagatt
cttggcgtgacctttacccgtaaagccgcgggcgagctcacggcacgcatcaacgcacaa
ttggacatgcttcgacgtgctgggatcggtccgatggaggacaccccagttccgcccagc
atctccacctaccactcgtacgctggcgatctggtcaaggactacggtctgcgactcggg
gttgaaccggacgcgcggcttctgggcgaggccgaagcgtggcaaatcgcgcacaggatt
gttcgcaattattcgggcaatctcgaaagcgtcgagaactcgaatgccagcaccctgacc
caggccgtgctgaagttttccggggagctcgcggagcatcaggtttctcaggagcaggct
cgcgactacttgaaatcacttcgcttgcagctagaagcgcttcccctcggacgaaaaaag
agaatcgcagctgacacgaagcttctcggcaagctgcttgaacgggaaattgtcgccgag
ctcgtgggcgcctaccaacggtacaagcacgaacacgacctcctggacttcggtgacttg
atagccattgcggcagatattgctgagagggtccccgttgcccggcagaccgagcgtgac
cgcttcaaagtggtgctcttggacgaattccaagacacctcacacgcgcagatggtgttg
ttctcgaagatcttcggcgacggtcatcccgtaaccgctgtgggtgacccgaaccagtcc
atctacggattccgtggcgcttctgctggccagctcaacgagttcccgcttcagtttccg
ctggtacaaccagacggaaatcgcgagcgggcaaaggtcgcctacctcaccaccgcctgg
cgcaattcccgtacggtcttgagcgcagcaaatcaggtggcagcaccattgttgaccgcc
tcgatgtcggatggccgcagtgttccactcaagaagctcaccgaaagcccggtagcaacg
gaagggcgagtgcaccttgcgttcgttgaaaccgaggtcgccgaagcgcggctgatcgcc
gagcaactggatctcgagctcagacccggccttgaaggaaaagagccgttgaagtccgcg
gcggttttgagccgcaccaaggcgggcttcgctgccattgccgacgcgttggacgaacgc
gggctgccgaacgaaaccaccggattgggtgggctgttggatgcccccgaggttggtgtc
attgtcagcacgcttcaggtcatctctaatcctcatcgccctgatcacttgtggcgcttg
cttgcgggcgcgcgatggcgtttgggtgccgcggatctgattgcgttgaatgattggtcc
agagagcttgaacgacgacgtagcccgcgtcaagcggtagcggatgatgcggacacacca
ctttttgcaacggaattgctggagtcggcttcgctgattgaggccattgaggagcttccg
cgcaccgattgggtgagtagccgtagcggcagaacgctatcttccgccgctcgggaacga
ctcctggcgttatctgctgagctcaagagcctgcggcggcacgcgcacgatgatctggga
gatctggtgcgactcgttgagcgcactaccaatctcgatatcgagttggatgccaagcca
ggggtcaaccatcactcggcgcggaagcagctagatgcgttctttgatgtggtggacgaa
tttgtgcgtgctgcagatcgccctcgtcttcaagagttcctggactgggtggacgctgcc
gcagaacatgaaaacggactggacctggctccggacgaacccaaaccgggcaccatccag
atccttaccgttcactcgtcgaagggactcgaatgggatgttgtggctgtcccgtccatg
acggcgaagaaattcccgtcgatgtcgaattcttcgcggtggacggtgggttcttccgcc
ttgccgtgggaacttcgcggtgaccacaggtccctcccgcaatggcgaacggacggagag
acactcaaagaagttgtagatgcggagaaagcctacgctgaggatgagaaagagcatcga
gagaacgaggagcgacgcctcgcctacgtagccctaactcgggcaaaggacttgttgtta
tgcactgcggccgcctactacggtgcggccgtcaaaccacacgaaccctcaccgttcctc
ttggacgtgaaggaactgagcgacaacaccctgagcgaaagctcggacgcaacctcagtg
cgcgtgctggggtggctcgaagaagacgaaatcccagcagacaaccctgaagcgggacgt
gaaagcgcggccgcctggcctttcgacccgcttgccgggcctacggtgacggaaagggga
ccgcagcttgaagagccgatcgtcaaagagccgctgaactcacgtcggcctgcgctaacc
acacttgccggtctagttcgcgacggcttcgagccgtgggagacgctgagaactcagccg
ggatcggatccttcaagtttaatgcaatcagatcttggcaaggaccttcttcaggagacc
ctcgccgtgttgacccgacgcatggaactttcaggttctcgcgcaattcactcggtgggc
gtaccaaaacacttgagcccatcgatgctcgtggaagcggcctccaatgccgaagccgct
caacgtcaatacttgcggcccgtgccgtcgcgtccatcaaaggaagcgcacttgggcaac
ctcttccacgagtgggtggagcggttctacaagacgcctgtgctcttggacctcgaagat
gtcatgccggcctcggacgaggaatccttgcagcagctcgaagtactcaaagacaagttc
cgggcctccgaatggtcctcgaaacaagctgaggaagtggaagtccccttcgatcagttg
gtcgccggagtacccgttcgagggcgcatcgacgccgtattcaagcacggagacaccttt
gagatcgtggactggaaaaccggccacgtcccatccggccaggaccgagaaaacaagaag
gttcagctgtccatgtaccggctagcgttcgcacgcagtcgcggcgtggacccggaaaag
gtcagcgcggcgttctattacgtgaaccacggccagacgttacgttttacggagttccat
tccgaagctgaactcgaagcgctgatcgacacctacaggtcggcgtcgacgaactag
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integrated database retrieval system
