Neomicrococcus aestuarii: BHE16_00135
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Entry
BHE16_00135 CDS
T04559
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nae
Neomicrococcus aestuarii
Pathway
nae03420
Nucleotide excision repair
nae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHE16_00135
03430 Mismatch repair
BHE16_00135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nae03400
]
BHE16_00135
Enzymes [BR:
nae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHE16_00135
DNA repair and recombination proteins [BR:
nae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHE16_00135
MMR (mismatch excision repair)
Other MMR factors
BHE16_00135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
RNA_pol_N
Sulfotransfer_3
C1_1
Motif
Other DBs
NCBI-ProteinID:
APF39687
UniProt:
A0A1L2ZKG6
LinkDB
All DBs
Position
31126..33252
Genome browser
AA seq
708 aa
AA seq
DB search
MSEERILAGLDEEQREVASNLSGPMCVLAGAGTGKTRAITHRIALGVHSGVYVQQQLLAV
TFTARAAGEMRTRLRELGAPLVQARTFHSAALRQLQYFWPQAVGGSIPQLVDHKAPHIAE
AVRRLRLSADRALIRDLASEIEWAKVSMLTADSYVKAAEGRARVGDLEPQTVARLFSAYE
DVKKDRVLIDFEDVLLLTVAILEEDPRILGEIHRQYRHFTVDEYQDVSPLQERLLKLWVG
DRNELCVVGDASQTIYSFTGATPRHLLEFSKTYPDAKVVRLIRDYRSTPQVVQLANKLLE
SRRIERNMPDADVRWPQPLHLVSQRESGKTVEFKEFPDDEAEASSIAARIKDLVDHGTSA
RDIAILLRTNGQTEAYERALSAAGLSYQLRGGERFFQRNEIREAMMLLRAAAKTRSGEPA
SGTVAELLMSIGYSAQAPESGGATRERWESLSALVTLSEELGDATTEGPAASLGQFVAEM
EARAATQHAPQVEGVTVASLHSAKGLEWGAVFLAGLSEGLLPISFAKDQAGYDEERRLLY
VGITRARDFLHLSWSLARTPGGRAHRTPSRFLDGLRPQKARMRREDDAAGSASLSRSAPR
AKARGPVRCRTCGKVLDTPAERKLKRCLDCPASYDEALLDALKAWRLETSRAAEVPAYVV
FTDATLMAIAEDSPETMEALSRISGVGESKLERFGEQVLGILKEHVAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaacgaatcctcgccggccttgacgaagaacagcgcgaagtcgctagcaac
ctgtccgggcccatgtgcgtcctcgcgggtgcgggtaccggtaagacccgtgccatcacg
caccgcattgccctgggcgtgcattcaggagtgtacgttcagcagcaactgttggccgtg
acgtttacggcgcgagcagctggagagatgcgcacacgattgcgagagttgggggcgccg
ctggttcaagcgcgcaccttccactccgccgcgttgcgtcagctccagtacttctggccg
caggccgtgggtggctctattcctcaattggtggaccacaaggcgccacacatcgctgaa
gccgtgcgccgattgcgcttgagcgcggaccgggcgttgatccgagacctcgcttctgaa
attgagtgggccaaagtttcgatgctcacagcggacagctatgtgaaggctgctgagggt
cgtgctcgtgtgggggatttggaaccgcaaacggtggcccgactcttctctgcgtatgag
gacgtcaagaaggatcgagtgctgatcgacttcgaagacgttctcctgctcacggtggcc
atccttgaagaggatccgcggatcttgggggagattcaccgccagtaccgccacttcacc
gtggacgagtaccaggacgtttcgccgcttcaggagcggctcctcaaactctgggtcggc
gatcgcaacgagctgtgcgttgtgggcgatgctagccagaccatctactccttcacgggc
gcgacgcctcgtcacttgctggagttctccaagacctacccggacgccaaagtggttcgc
ctgattcgcgactaccgttccactcctcaagtggttcagctggccaacaaactgttggag
tcgcggcgtattgaacgcaacatgcctgacgccgacgtgcgctggccgcaaccgctgcac
ttggtatctcagcgcgagagcggcaagaccgtggagttcaaagaattcccggatgatgaa
gccgaggcctcaagcatcgccgcacgcatcaaggatctggtggatcacggcaccagtgcc
cgagacatcgcgatcctcttgcgtaccaatggccaaactgaagcctacgagcgcgccctc
tccgctgcagggttgagctaccagttgcgcggtggcgaacggttcttccaacgcaacgag
atccgtgaggccatgatgctgcttcgcgcggcggcaaaaactcgatccggtgagccggcc
tccggcacggttgccgagctgctcatgagcatcggctactcggcccaagcgccggaatct
ggtggagcaacccgcgagcgctgggagtccctctccgccttggtcaccttgtccgaagag
ctaggggacgcaaccacggagggccccgcagcatccttgggtcagttcgtggcggaaatg
gaagcgcgagcagccacccagcacgcaccccaggttgaaggcgtcaccgtggcgagcctt
cactccgccaagggcctcgagtggggcgccgtgttcttagccggactgagcgaaggcctc
ttgccgatctccttcgcgaaagaccaagccggttacgacgaagaacggcgactgctttac
gtgggcatcacccgagcccgagatttcctgcacttgagctggtcccttgcacgcaccccg
ggcggacgcgctcaccgcacgccgtcccgattccttgatggcttgcgtccgcagaaggcc
cggatgaggcgagaagacgacgccgcaggttcagcctcgctgtcccgttcggctccgcgg
gccaaggctcgtggtcccgtccgttgccgtacgtgtggcaaggttctggacaccccggct
gagcgcaaactcaagcgatgcctggattgcccggcgtcctacgacgaagctctgctcgat
gcgttgaaagcctggcgtctagagacctcacgcgccgccgaagttccggcctatgtggtg
tttactgatgccacgttgatggctatcgccgaggacagcccggagaccatggaagcgctc
tctcgaatctcgggtgtgggtgaatccaaactggagcgttttggtgagcaagtgttgggc
atcctcaaagagcacgtcgccgagtag
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