Neomicrococcus aestuarii: BHE16_01170
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Entry
BHE16_01170 CDS
T04559
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nae
Neomicrococcus aestuarii
Pathway
nae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHE16_01170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nae03021
]
BHE16_01170
03019 Messenger RNA biogenesis [BR:
nae03019
]
BHE16_01170
Transcription machinery [BR:
nae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BHE16_01170
Messenger RNA biogenesis [BR:
nae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BHE16_01170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APF39857
UniProt:
A0A1L2ZKZ0
LinkDB
All DBs
Position
270439..272781
Genome browser
AA seq
780 aa
AA seq
DB search
MTETTSPEAGVDTTNTTKSAGLAGLKLAQLQTLASQLGISGGSRMRKGDLVAAISSHQRG
ESASSDSASSSKSAAAPVAETSVASPSADALAAPTETAAPAARATSTRRRRVAGAAAGAP
VAGSETPVAETSPVSATTAAPVSSAPAVQEAPVAQEAPVASGDSEEAPRESRSRDSRSRG
RGRRASAPAGEPGQDSDSAADASSADAANATNTGENAESSDQRGEGRDEERNDSRNENRR
SRNRRGRGNRNEDESQEGQDNAGENQRGDRGDRQDRSERQDRGQGSEQREQRNDREQRGE
RNDRNERNDRSDRNERTDRNERNDRQERDEVDGETSRNDRRNTRNQRDSENDNSRTNRRD
RQRDRNNRNDRNDRNNDRRNRRGNRNQPDVDDTEFTEDDVLLPVAGILDVLENYAFIRTS
GYLPGANDVYVSLNQVKRYNLRKGDAVVGAIRAPREGENQNQRQKFNALVKLQSVNGKPA
DENTDRVEFNKLVPLYPQERLRLETDSKIIGPRVIDLIAPIGKGQRGLIVSPPKAGKTMV
LQSIANAVTKNNPEVHLMMVLVDERPEEVTDMQRSVRGEVIASTFDRPADDHTTVAELAI
ERAKRLVELGMDVVVLLDSMTRLGRAYNQSAPASGRILSGGVDAAALYPPKRFFGAARNI
ENGGSLTILATALVETGSKADEVIFEEFKGTGNMELRLSRNLADKRIFPAVDVNASGTRR
EENLLSPEEIKIMWRLRRVLSGLDQQQALELLTTKIKETQSNAEFLMLVSKTTLGSKNES
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccactagccccgaagcgggcgtggacaccacaaataccaccaagagtgct
ggacttgcaggcttgaagcttgctcagttgcagactttggcctcgcagctgggaatctca
ggcggttctcgcatgcgtaagggcgatctcgtcgccgcaatttctagccaccagcgcggt
gaatcagcttcctcggattcggcatcttcgtcgaagtcggcagctgccccagttgctgaa
acgtccgtagcgtcgccaagtgctgacgctcttgctgctccaactgagaccgccgctccg
gccgctcgtgcaaccagcacgcgtcgccgtcgtgttgccggcgccgccgcaggcgcacct
gtcgccggcagcgagaccccagtagccgagacgtcgccagtctccgctaccactgcagcc
ccagtttcctcggctccggccgttcaggaggcaccggtagctcaggaagctcctgttgct
tcgggtgactcagaagaagcaccacgcgaatcccgttcacgtgattctcgaagccgtggt
cgcggacgccgtgcgtctgccccagcaggcgagccaggtcaggattccgactccgcagca
gatgcttcttcggccgatgctgcgaacgccacgaacaccggcgaaaacgccgagtcttcg
gatcagcgtggcgaaggccgcgatgaagagcgcaacgactctcgcaacgagaaccgccgt
tcccgcaaccgtcgtggtcgcggaaaccgcaatgaggacgaaagccaagaaggtcaggac
aacgctggtgagaaccagcgcggagatcgtggcgatcgccaggaccgctccgagcgtcag
gatcgcggacagggctccgagcagcgtgaacagcgcaacgaccgcgaacagcgcggcgag
cgtaatgatcggaacgagcgcaatgatcgctccgaccgtaacgagcgcaccgaccgcaat
gaacgcaacgatcgccaggagcgcgatgaagttgacggcgagaccagccgcaacgatcgc
cgcaacactcgcaatcagcgcgattctgagaacgataactcgcgcaccaaccgccgcgat
cgtcagcgtgaccgcaacaaccgcaatgatcgcaacgaccgtaacaacgatcgtcgcaac
cgccgcggcaaccgtaaccagccggacgttgacgacaccgagttcaccgaggatgacgtc
ctattgccagtagctggcatcttggacgttctcgagaactacgccttcattcgcacctcc
ggctacttgccgggtgccaacgatgtctacgtttccttgaaccaggtgaagcgttacaac
ctgcgtaagggcgacgccgtagtcggtgccatccgcgcacctcgcgaaggcgaaaaccag
aaccagcgtcagaagttcaacgctctggtgaagttgcagagcgtcaacggcaagccagct
gatgagaacactgatcgtgttgagttcaacaagcttgttcctttgtacccacaagagcgc
ttgcgccttgagacggactcgaagatcattggcccacgtgtcattgacctgatcgctcct
attggtaagggccagcgcggtttgatcgtgtcgcctccaaaggccggtaagaccatggtc
ttgcagtccattgcgaacgccgtcacgaagaacaacccagaagtgcatctcatgatggtg
cttgtggacgaacgtcctgaagaagtgacggacatgcagcgctcggtgcgcggcgaagtc
attgcttcgactttcgaccgtccagcagacgatcacaccacggtcgccgaactcgctatt
gagcgcgctaagcgcttggtggagctgggcatggatgttgtggtcctccttgactcgatg
actcgcttgggccgtgcttacaaccagtccgcaccagcatccggacgtatcttgtccggt
ggtgtggatgctgcggcactgtacccgccaaagcgtttcttcggtgctgctcgcaacatc
gaaaacggtggctcgctcaccatcttggctaccgctcttgtagagaccggatccaaggct
gacgaggtcatcttcgaagagttcaagggcaccggcaacatggagcttcgcttgtcccgc
aaccttgcggataagcgcatcttcccagctgttgacgtcaacgcctccggcacccgccgt
gaagaaaacctgctctcacctgaggaaatcaagatcatgtggcgcttgcgccgcgtgctc
tcgggcctcgatcagcagcaggcattggaattgttgaccaccaagatcaaggaaacccag
tccaacgctgaattcttgatgctcgtttccaagaccactttgggatccaagaacgagtcc
tag
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