Neomicrococcus aestuarii: BHE16_03200
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Entry
BHE16_03200 CDS
T04559
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
nae
Neomicrococcus aestuarii
Pathway
nae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHE16_03200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nae03400
]
BHE16_03200
DNA repair and recombination proteins [BR:
nae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHE16_03200
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHE16_03200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_16
APS_kinase
AAA_25
AAA_22
AAA_23
NACHT
DnaJ_CXXCXGXG
BCA_ABC_TP_C
cobW
Viral_helicase1
ScfRs
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
APF40195
UniProt:
A0A1L2ZL93
LinkDB
All DBs
Position
complement(725895..728780)
Genome browser
AA seq
961 aa
AA seq
DB search
MSGGGAVTHKPDLTRILVQGARENNLQNIDVELPRDSMIVFTGLSGSGKSSLAFDTIFAE
GQRRYVESLSAYARQFLGQVDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEIYDYM
RLLWARVGRPHCPVCGEAITKQTPQQIVDQLLELPEKTRFQVLAPVVRGRKGEFVDLFKE
LAAGGYSRARIDGETVQLSEPPVLKKHYKHSIEVVIDRLAIRDGVRQRLTDSVETALKLA
DGRVLIEFVDLDENDELRVRAYSENLACPNEHPLTIDEIEPRSFSFNNPFGACPVCTGIG
TRLEVDEELVVPDHDATINEGAIAPWNLGKATSEYWNRLLEGLGEEMGFDLDTPWKDLSK
EARTAILHGRNHKVVVQYRNRFGRERKYSTGFEGAIQYIERKHQETESDYARDRYEEYMR
LSPCPECGGARLNPTSLSVLISGKSIAEVSAMQLRDCAEFFGTLELTNREAQIAAQVLKE
ILARLTFLLDVGLEYLNLERAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQR
DNRRLIETLTRLRDLGNTLIVVEHDEDTIAEADWIVDIGPGAGEHGGRVVHSGSLEELKA
NEESITGAYLSGRKSIAVPPKRRKRDKDRFVSVVDAHENNLQNVTVKFPLGVLTAVTGVS
GSGKSTLVNDILYKTLANKLNGAKQVAGRHKRIEGLDQLDKVVHVDQSPIGRTPRSNPAT
YTGVFDNIRKLFAETNEAKVRGYLPGRFSFNVKGGRCESCSGDGTLKIEMNFLPDVYVPC
EVCHGARYNRETLEVHYKGKNIAEVLNMPIEEAAEFFAAFTPIARHLNTLVDVGLGYVRL
GQPATTLSGGEAQRVKLAAELQKRSNGRSIYVLDEPTTGLHFEDIRKLLLVLQGLVDKGN
TVITIEHNLDVIKSADWIIDMGPEGGSGGGRVIAEGTPEQVAKTKGSFTGEFLAELLNPA
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcggtggggctgtcacccacaagccagatctgacacggattctcgttcaaggt
gcccgcgagaacaacctgcagaatattgatgttgagttgccgcgcgactcaatgatcgtc
ttcacgggtctctcgggttcgggtaaatcctcgcttgccttcgacacgattttcgcggaa
ggtcagcggcgctacgtggagtcgctttccgcctacgcgcgtcaattcttgggccaggtg
gataagcctgacgttgatttcattgagggtttgtccccagcggtttcgattgaccagaaa
tcaaccagcaagaaccctcgttctaccgtcggcaccatcacggaaatctacgattacatg
cgcttgttgtgggcgcgcgtgggtcgtccgcattgtcccgtgtgtggtgaagctattacc
aagcagactccgcagcagatcgtggatcagctcttggaactgccggagaagactcgcttc
caggtcctggcgccggtcgtgcgtggccgcaagggtgaattcgttgatctcttcaaggag
ctcgctgcgggcggttactcgcgtgcgcgcatcgatggggaaacggttcaactctcagag
ccacctgtcctcaagaagcattacaagcactccattgaggtggtcattgaccgcttggca
attcgtgatggtgtgcgtcagcgcttgacggattccgtggaaacggcgttgaagctcgct
gatggtcgagtgctcatcgagttcgttgaccttgacgagaatgatgaattgcgagtgcgc
gcctatagcgagaatctcgcgtgccctaacgagcacccgctgactatcgatgagattgaa
ccgcggtcgttctccttcaataatccttttggtgcgtgtccggtctgtaccggtattggt
acgcgacttgaagtcgatgaagagctcgtggtgcccgatcatgacgccaccatcaacgaa
ggcgccattgcgccgtggaacctcggcaaggcaaccagtgagtactggaaccgtctgctc
gaaggtctcggcgaggagatgggctttgacctggatacgccgtggaaggatttgagcaaa
gaggctcggacagcgatcctgcatgggcgcaaccacaaggtagttgtccagtatcgaaac
cgttttggccgcgaacgtaagtattcgaccggttttgaaggcgccattcagtacatcgag
cgcaagcatcaagagaccgaatcggactacgcacgcgatcgctacgaagagtacatgcga
ttgtccccgtgtcctgaatgtggtggcgcaaggctaaaccccacctcgctttcggtgctg
attagcggcaagtccattgccgaggtcagcgctatgcagttgcgagattgcgccgagttc
tttggaacgttggagctgaccaaccgtgaagcgcagatcgctgcccaggtgctcaaggag
atccttgctcgcttgacgttcttgctggacgttggtttggagtacttgaacctcgagcgt
gcggcgggcacgttgtccggcggtgaggcacagcgcatccgtttggcgacccaaattggt
tcaggactcgtaggcgttctctacgtgttggacgagccgtccattggcttgcaccagcgc
gataaccgtcgactcattgaaaccctgacccgccttcgagatctaggcaacaccctgatt
gtggtggaacacgatgaggacaccattgctgaagccgactggattgtagatattggaccg
ggcgccggcgaacacggtggccgagtggtgcactcgggaagcttggaagaactcaaagcc
aacgaagaatccattaccggtgcctacctctccggtcggaaatccattgcggttccgccg
aagcgtcgtaagcgcgacaaggatcgtttcgtgagcgtcgtggatgctcacgagaataac
ttgcagaacgtgaccgtgaagttccccttgggcgtgctgacggctgttaccggtgtcagc
ggttcgggtaagtccactctcgtcaatgacatcttgtacaagacacttgctaataagctc
aacggtgccaagcaggttgctggccgtcacaagcgaattgaaggtctggaccagctggac
aaggttgttcacgtcgatcagagcccgattggccgcacccctcgctccaacccggcaacc
tataccggtgtattcgacaacatccgaaagcttttcgctgagacgaacgaggcaaaggtc
cgcggttacttgcctggacgtttctccttcaacgtcaagggtggccgttgcgaatcctgc
tcgggcgacggaacgctcaagatcgaaatgaacttcctgcctgacgtctacgtcccgtgt
gaagtgtgccatggtgcccgctacaaccgcgagacgctcgaagtgcactacaagggcaag
aacattgctgaagtgctgaacatgcccattgaagaggctgccgagttctttgcggcgttc
acaccgattgctcgtcacctgaatactttggttgacgtgggtctgggctatgttcgcttg
ggtcagccagcaacgacgctgtccggtggtgaagcgcagcgagtaaagctggccgctgaa
cttcaaaagcgttcgaacggtcgaagcatttacgtgttggacgagcccactaccggtctt
cactttgaagatattcgtaagcttctgttggtgcttcaaggcttggtggacaaaggcaac
accgtcatcaccatcgagcacaaccttgatgtcatcaagtccgctgactggatcatcgac
atgggtccggaaggcggctctggcggcggtcgggtgattgctgaaggaactccggagcag
gttgcaaagaccaagggaagcttcacgggtgagttcttggcggagttgttgaacccagcc
aagtag
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