KEGG   Neomicrococcus aestuarii: BHE16_03200
Entry
BHE16_03200       CDS       T04559                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
nae  Neomicrococcus aestuarii
Pathway
nae03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BHE16_03200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nae03400]
    BHE16_03200
DNA repair and recombination proteins [BR:nae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BHE16_03200
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BHE16_03200
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_21 nSTAND1 AAA_16 APS_kinase AAA_25 AAA_22 AAA_23 NACHT DnaJ_CXXCXGXG BCA_ABC_TP_C cobW Viral_helicase1 ScfRs Herpes_Helicase
Other DBs
NCBI-ProteinID: APF40195
UniProt: A0A1L2ZL93
LinkDB
Position
complement(725895..728780)
AA seq 961 aa
MSGGGAVTHKPDLTRILVQGARENNLQNIDVELPRDSMIVFTGLSGSGKSSLAFDTIFAE
GQRRYVESLSAYARQFLGQVDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEIYDYM
RLLWARVGRPHCPVCGEAITKQTPQQIVDQLLELPEKTRFQVLAPVVRGRKGEFVDLFKE
LAAGGYSRARIDGETVQLSEPPVLKKHYKHSIEVVIDRLAIRDGVRQRLTDSVETALKLA
DGRVLIEFVDLDENDELRVRAYSENLACPNEHPLTIDEIEPRSFSFNNPFGACPVCTGIG
TRLEVDEELVVPDHDATINEGAIAPWNLGKATSEYWNRLLEGLGEEMGFDLDTPWKDLSK
EARTAILHGRNHKVVVQYRNRFGRERKYSTGFEGAIQYIERKHQETESDYARDRYEEYMR
LSPCPECGGARLNPTSLSVLISGKSIAEVSAMQLRDCAEFFGTLELTNREAQIAAQVLKE
ILARLTFLLDVGLEYLNLERAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQR
DNRRLIETLTRLRDLGNTLIVVEHDEDTIAEADWIVDIGPGAGEHGGRVVHSGSLEELKA
NEESITGAYLSGRKSIAVPPKRRKRDKDRFVSVVDAHENNLQNVTVKFPLGVLTAVTGVS
GSGKSTLVNDILYKTLANKLNGAKQVAGRHKRIEGLDQLDKVVHVDQSPIGRTPRSNPAT
YTGVFDNIRKLFAETNEAKVRGYLPGRFSFNVKGGRCESCSGDGTLKIEMNFLPDVYVPC
EVCHGARYNRETLEVHYKGKNIAEVLNMPIEEAAEFFAAFTPIARHLNTLVDVGLGYVRL
GQPATTLSGGEAQRVKLAAELQKRSNGRSIYVLDEPTTGLHFEDIRKLLLVLQGLVDKGN
TVITIEHNLDVIKSADWIIDMGPEGGSGGGRVIAEGTPEQVAKTKGSFTGEFLAELLNPA
K
NT seq 2886 nt   +upstreamnt  +downstreamnt
ttgagcggcggtggggctgtcacccacaagccagatctgacacggattctcgttcaaggt
gcccgcgagaacaacctgcagaatattgatgttgagttgccgcgcgactcaatgatcgtc
ttcacgggtctctcgggttcgggtaaatcctcgcttgccttcgacacgattttcgcggaa
ggtcagcggcgctacgtggagtcgctttccgcctacgcgcgtcaattcttgggccaggtg
gataagcctgacgttgatttcattgagggtttgtccccagcggtttcgattgaccagaaa
tcaaccagcaagaaccctcgttctaccgtcggcaccatcacggaaatctacgattacatg
cgcttgttgtgggcgcgcgtgggtcgtccgcattgtcccgtgtgtggtgaagctattacc
aagcagactccgcagcagatcgtggatcagctcttggaactgccggagaagactcgcttc
caggtcctggcgccggtcgtgcgtggccgcaagggtgaattcgttgatctcttcaaggag
ctcgctgcgggcggttactcgcgtgcgcgcatcgatggggaaacggttcaactctcagag
ccacctgtcctcaagaagcattacaagcactccattgaggtggtcattgaccgcttggca
attcgtgatggtgtgcgtcagcgcttgacggattccgtggaaacggcgttgaagctcgct
gatggtcgagtgctcatcgagttcgttgaccttgacgagaatgatgaattgcgagtgcgc
gcctatagcgagaatctcgcgtgccctaacgagcacccgctgactatcgatgagattgaa
ccgcggtcgttctccttcaataatccttttggtgcgtgtccggtctgtaccggtattggt
acgcgacttgaagtcgatgaagagctcgtggtgcccgatcatgacgccaccatcaacgaa
ggcgccattgcgccgtggaacctcggcaaggcaaccagtgagtactggaaccgtctgctc
gaaggtctcggcgaggagatgggctttgacctggatacgccgtggaaggatttgagcaaa
gaggctcggacagcgatcctgcatgggcgcaaccacaaggtagttgtccagtatcgaaac
cgttttggccgcgaacgtaagtattcgaccggttttgaaggcgccattcagtacatcgag
cgcaagcatcaagagaccgaatcggactacgcacgcgatcgctacgaagagtacatgcga
ttgtccccgtgtcctgaatgtggtggcgcaaggctaaaccccacctcgctttcggtgctg
attagcggcaagtccattgccgaggtcagcgctatgcagttgcgagattgcgccgagttc
tttggaacgttggagctgaccaaccgtgaagcgcagatcgctgcccaggtgctcaaggag
atccttgctcgcttgacgttcttgctggacgttggtttggagtacttgaacctcgagcgt
gcggcgggcacgttgtccggcggtgaggcacagcgcatccgtttggcgacccaaattggt
tcaggactcgtaggcgttctctacgtgttggacgagccgtccattggcttgcaccagcgc
gataaccgtcgactcattgaaaccctgacccgccttcgagatctaggcaacaccctgatt
gtggtggaacacgatgaggacaccattgctgaagccgactggattgtagatattggaccg
ggcgccggcgaacacggtggccgagtggtgcactcgggaagcttggaagaactcaaagcc
aacgaagaatccattaccggtgcctacctctccggtcggaaatccattgcggttccgccg
aagcgtcgtaagcgcgacaaggatcgtttcgtgagcgtcgtggatgctcacgagaataac
ttgcagaacgtgaccgtgaagttccccttgggcgtgctgacggctgttaccggtgtcagc
ggttcgggtaagtccactctcgtcaatgacatcttgtacaagacacttgctaataagctc
aacggtgccaagcaggttgctggccgtcacaagcgaattgaaggtctggaccagctggac
aaggttgttcacgtcgatcagagcccgattggccgcacccctcgctccaacccggcaacc
tataccggtgtattcgacaacatccgaaagcttttcgctgagacgaacgaggcaaaggtc
cgcggttacttgcctggacgtttctccttcaacgtcaagggtggccgttgcgaatcctgc
tcgggcgacggaacgctcaagatcgaaatgaacttcctgcctgacgtctacgtcccgtgt
gaagtgtgccatggtgcccgctacaaccgcgagacgctcgaagtgcactacaagggcaag
aacattgctgaagtgctgaacatgcccattgaagaggctgccgagttctttgcggcgttc
acaccgattgctcgtcacctgaatactttggttgacgtgggtctgggctatgttcgcttg
ggtcagccagcaacgacgctgtccggtggtgaagcgcagcgagtaaagctggccgctgaa
cttcaaaagcgttcgaacggtcgaagcatttacgtgttggacgagcccactaccggtctt
cactttgaagatattcgtaagcttctgttggtgcttcaaggcttggtggacaaaggcaac
accgtcatcaccatcgagcacaaccttgatgtcatcaagtccgctgactggatcatcgac
atgggtccggaaggcggctctggcggcggtcgggtgattgctgaaggaactccggagcag
gttgcaaagaccaagggaagcttcacgggtgagttcttggcggagttgttgaacccagcc
aagtag

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