Naasia aerilata: GCM126_04640
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Entry
GCM126_04640 CDS
T09129
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
naei
Naasia aerilata
Pathway
naei03420
Nucleotide excision repair
naei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCM126_04640
03430 Mismatch repair
GCM126_04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naei03400
]
GCM126_04640
Enzymes [BR:
naei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM126_04640
DNA repair and recombination proteins [BR:
naei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM126_04640
MMR (mismatch excision repair)
Other MMR factors
GCM126_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BDZ44555
LinkDB
All DBs
Position
complement(417061..418779)
Genome browser
AA seq
572 aa
AA seq
DB search
MSAEDLLEGLDPEQRGAAETLLGPVCLLAGAGTGKTRAITHRIAYGVASGVYPPGKVMAL
TFTTRAAGELRTRLRSLGAAGVQARTFHSAALSQLSYFWPQVVGGTLPRVLDSKARLLAQ
AAEAVGVKVDTPALRDIAAEIEWRKVSGISIEDYALRADDRPLPQGLDGGRMSSLHRAYE
ELKDARRQIDFEDVLLATIGMIEEEPRVAQHVREQYRFFVVDEYQDVSPLQHQLLAAWLG
DRRDVCVVGDASQTIYSFAGARADYLLGFGGRYPDARVIRLERNYRSVPGVIAAANRLMR
DRPGALSLVAASAPGESAEPPVEVTGYPTEPAEARSIADDVAARIAAGERPRDIAVLYRI
NSQSAAFEAAFAERGIACAVRGSERFFEKREVKEAMMMLRAAVLTLAQEPLFKTVSDVLR
SLGWSQQPPEAPGAIRDRWESLDTIMGLAEEAPAGTSLAQFVEDLAERQAAQHEPTVDAV
TLATLHSAKGLEWDRVYVAGLSEGYLPISYAKTPETIEEERRLLYVGVTRARSALRLSWA
AVGPHRATPREPSRFLEELGTSIRDGAAIAAR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgaggacctgctcgaggggctcgatccggagcagcgcggcgccgcggagacc
ctgctcggccccgtctgcctcctcgccggagccggcaccggcaagacccgggccatcacc
caccgcatcgcctacggcgtggcctccggggtgtacccgccgggcaaggtgatggcgctc
accttcaccacgcgcgccgccggggagctgcgcacgcgcctccgcagcctgggcgcggcc
ggcgtgcaggcccgcacgttccactccgccgcgctgtcgcagctcagctacttctggccg
caggtcgtcggcgggacgctgccccgcgtgctcgacagcaaggcgcgcctcctcgcccag
gcggcggaggcggtgggcgtgaaggtcgacacaccggcgctccgcgacatcgcggccgag
atcgagtggcggaaggtcagcggcatctcgatcgaggactacgcgctccgtgccgacgac
cggccgctgccgcagggcctcgacgggggacggatgagctccctgcaccgcgcatacgag
gagctgaaggacgcgcggcgccagatcgacttcgaggacgtgctgctcgcgacgatcggc
atgatcgaggaggagccacgggtcgcgcagcacgtgcgggagcagtaccggttcttcgtc
gtcgacgagtaccaggacgtgtcgccgctccagcaccagctgctcgccgcgtggctcggc
gaccggcgggacgtctgcgtcgtcggcgatgccagccagacgatctactcgttcgcgggc
gcccgggccgactacctcctcggcttcggcggccgctacccggacgcgcgcgtcatccgg
ctggagcgcaactaccgctcggtgccgggcgtgatcgcggcggcgaaccggctgatgcgc
gaccggcccggcgcgctctccctggtcgcggcgtccgcgcccggcgaatcggccgagccc
ccggtggaggtgaccggctacccgacggagcccgcggaggcccggtccatcgcggacgac
gtggcggcgcggatcgcagcgggggagcggccgcgggacatcgcggtgctctaccggatc
aactcccagtccgcggcgttcgaggcggccttcgcggagcgcggcatcgcctgcgcggtg
cgagggtcggagcggttcttcgagaagcgtgaggtgaaggaggcgatgatgatgctccgc
gccgccgtcctgacgctcgcgcaggagccgctgttcaagacggtgagcgacgtcctccgc
tccctcggctggtcgcagcagccacccgaggcgcccggcgccatccgggaccgctgggag
tcgctcgacacgatcatgggcctcgcggaggaggcgcccgcgggaacctcgctcgcgcag
ttcgtggaggacctcgccgagcggcaggccgcccagcacgagcccaccgtcgacgcggtc
accctggcgaccctccactccgcgaagggtctcgagtgggaccgggtctacgtcgcaggg
ctgtccgagggctacctgcccatcagctacgcgaagacgcccgagaccatcgaggaggag
cggcgcctcctctacgtcggcgtcacccgggcgcggtctgcgctgcggctgtcctgggcc
gccgtcggcccgcaccgggcgacgccgcgggagccgtctcggttcctggaagagctcggc
acgagcatccgggatggggcggccatcgccgctcgctga
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