Naasia aerilata: GCM126_08700
Help
Entry
GCM126_08700 CDS
T09129
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
naei
Naasia aerilata
Pathway
naei03420
Nucleotide excision repair
naei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
naei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCM126_08700
03430 Mismatch repair
GCM126_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naei03400
]
GCM126_08700
Enzymes [BR:
naei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM126_08700
DNA repair and recombination proteins [BR:
naei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM126_08700
MMR (mismatch excision repair)
Other MMR factors
GCM126_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PACT_coil_coil
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDZ44961
LinkDB
All DBs
Position
complement(778519..780435)
Genome browser
AA seq
638 aa
AA seq
DB search
MSTIAPTSSPLLEGLNPQQREAVLYRGPALLIVAGAGSGKTRVLTHRIAGLLESREAWPS
QILAITFTNKAAGEMRERVRHLVGTAAEGMWISTFHSACVRILRREAEQFGYSRNFTIYD
SGDSRALIKRIIKDLEADVLGFTVASTAARISKLKNELADVESYARQANFNDPNEVMFVE
IFRQYSRALSSANAFDFDDLISQTVYLFRAFPHVAAAYQKRFRHILVDEYQDTNHAQYSL
IRELTKSPAELEPGLLAATEPASLTVVGDSDQSIYAFRGADIRNIVEFERDFPGAKVILL
EQNYRSTQNILSAANSVISNNFDRKDKKLWTADGDGEKIVGYTGYSGHDEAQFVADEIQA
LRDKGVAYHDMAVFYRTNSQTRALEEIFIRSAVPYRIIGGTKFYERAEIKDAMAYLIAVA
NPADTLAVRRILNTPKRGIGPATETQLATFAEKNEITFRDSLRHAKELGLGPKVTGAITA
LSDLLDEAAALTERPPTAPGDGVPEVLSLLISKGGLLDALRASRDPQDEARAENVEELVA
VTKEFQRNNPEGTLLDFLTEVSLVAAADDLDDQTGSVSLMTLHTAKGLEFEAVFLTGVEE
DLLPHRMSAGEPGAPRRSAGCSTWASPARASDSSSPWR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcactatcgcgccgacgtcatcaccgctgctcgaggggctcaatccgcagcagcgc
gaggccgtgctctaccgcggtcccgcgctcctcatcgtggcgggggccggctcgggcaag
acccgcgtcctcacccaccgcatcgccggcctgctcgagtcgcgggaggcgtggcccagc
cagatcctcgccatcaccttcacgaacaaggccgcgggggagatgcgcgagcgggtccgg
cacctcgtcggcaccgccgccgaaggcatgtggatctccaccttccactccgcctgcgtg
cggatccttcgccgggaggccgagcagttcggctacagccgcaacttcacgatctacgac
tcgggcgactcccgcgcgctgatcaagcggatcatcaaggacctcgaggccgacgtcctc
ggcttcacggtcgcttcgacggcggcccgcatctccaagctcaagaacgagctcgcggat
gtcgagagctacgcgcggcaggcgaacttcaacgaccccaacgaggtcatgttcgtcgag
atcttccgccagtactcgcgggccctctcgagcgccaatgcgttcgacttcgacgacctc
atcagccagacggtgtacctcttccgggcgttcccgcacgtcgctgccgcgtaccagaag
cggttccggcacatcctcgtcgacgagtaccaggacaccaaccacgctcagtactcgctc
atccgcgagctcacgaagtccccggccgagctggagccgggcctgctggccgccaccgag
ccggcctcgctcaccgtggtcggcgactctgaccagtcgatctacgcgttccgcggggcc
gacatccgcaacatcgtggaattcgagcgcgacttcccgggtgcgaaggtgatcctgctc
gagcagaactaccgctcgacccagaacatcctgagcgcggcgaactcggtcatctcgaac
aacttcgaccgcaaggacaagaagctgtggacggccgacggcgacggcgagaagatcgtc
ggctacacgggctattccgggcacgacgaggcgcagttcgtcgcggacgagatccaggcg
ctcagggacaagggcgtcgcgtatcacgacatggcggtcttctaccggaccaattcgcag
acccgtgcgctcgaggagatcttcatccgctcggccgtcccctatcggatcatcgggggc
accaagttctacgagcgcgcggagatcaaggacgcgatggcgtacctgatcgccgtcgcg
aatccggccgacaccctcgcggtgcggcggatcctcaacacccccaagcggggcatcgga
ccggccaccgagacccagctcgcgacattcgccgagaagaacgagatcaccttccgcgac
tcgctgcggcacgcgaaggagctcggcctcgggcccaaggtgacgggtgcgatcaccgcg
ctgtccgacctcctcgacgaggcggcagcgctcaccgagcggccgccgaccgctccgggt
gacggcgtgcccgaggtgctgtccctgctcatctccaaaggcgggctgctcgatgcgctc
cgcgcatcccgggatccgcaggacgaggcgcgcgccgagaacgtcgaggagctcgtggcg
gtgaccaaggagttccagcgcaacaaccccgagggcacgcttctcgacttcctcaccgag
gtgtccctggtcgccgccgccgacgatctcgacgaccagaccggctcggtgtcgctgatg
acgctgcacaccgcgaagggcctcgagttcgaggcggtgttcctgaccggtgtggaggag
gacctgctcccgcaccgcatgtcggcgggcgagccgggggccccgcggaggagcgcaggc
tgttctacgtgggcatcacccgcgcgcgcaagcgactcttcctctccctggcgatga
DBGET
integrated database retrieval system
