Naasia aerilata: GCM126_10160
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Entry
GCM126_10160 CDS
T09129
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
naei
Naasia aerilata
Pathway
naei02020
Two-component system
naei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
naei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM126_10160
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GCM126_10160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naei03021
]
GCM126_10160
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
naei02035
]
GCM126_10160
Transcription machinery [BR:
naei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM126_10160
Bacterial motility proteins [BR:
naei02035
]
Flagellar system
Flagellar assembly proteins
Stator
GCM126_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_10
MarR_2
HTH_5
HTH_Tnp_1
KORA
GntR
MarR
DUF7217
Motif
Other DBs
NCBI-ProteinID:
BDZ45107
UniProt:
A0ABM8GA66
LinkDB
All DBs
Position
complement(891934..892758)
Genome browser
AA seq
274 aa
AA seq
DB search
MATARSERNRLVVENLAIVGYLVNDVCSRASHLSRDDLASAGAVGLILAAESFDSSLGVP
FGAFARRRILGAIADEMRASDWATRTARKRIKESLAVKESLTAALGRTPTVDEIASSLGV
DKATATEALVDADRSVSTLDTTVADYLATDIASPEDTLMDTERTRYIRAAVTALPEKMRY
IVEQIYFEDRSVKDLAEELGATHSAISQQRAEAVRLMRDGLTTHYADEPAAEAETHSRVA
PARRSAYLARLAENAGAAMSRQMAPGLPARSAAS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttggctactgcacgttccgagcgcaatcggctcgtcgtagagaatctggcgatcgtcgga
tatctggtgaacgacgtctgctcacgcgcatcgcatctgtcccgcgacgacctggcgtcg
gccggcgccgtcggcctgatcctcgcggccgagtccttcgactcctcactgggagtgccg
ttcggagccttcgcacgccgccgcatcctcggggcgatcgccgacgagatgcgggcatcc
gactgggcgacccgcaccgcgcgcaagcgcatcaaggagtcgctcgcggtgaaggagtcc
ctcaccgccgctctggggcgcacgcccacggtcgacgagatcgcgtcctccctcggagtg
gacaaggcgaccgccaccgaggccctcgtggatgcggaccgcagcgtctcgaccctcgac
accacggtggccgactacctggccaccgacatcgcgagtcccgaggacaccctcatggac
accgagcgcactcgctacatccgcgcggccgtcacggcgctgccggagaagatgcgctac
atcgtggagcagatctacttcgaggaccgctcggtgaaggatctcgccgaggagctgggc
gcgacgcactccgccatctcgcagcagcgagcggaggccgtgcgcctcatgcgggacggt
ctcaccacgcactacgccgacgagccggccgccgaggcggagacccactcccgggtggct
cccgcgcggcgcagcgcctacctcgcccgcctcgctgagaatgcgggagcggcgatgagc
cgccagatggcgcccgggctccctgcccggtcagccgcatcttga
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