Naasia aerilata: GCM126_23450
Help
Entry
GCM126_23450 CDS
T09129
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
naei
Naasia aerilata
Pathway
naei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
naei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM126_23450 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
naei03000
]
GCM126_23450 (alkA)
03400 DNA repair and recombination proteins [BR:
naei03400
]
GCM126_23450 (alkA)
Enzymes [BR:
naei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GCM126_23450 (alkA)
Transcription factors [BR:
naei03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GCM126_23450 (alkA)
DNA repair and recombination proteins [BR:
naei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCM126_23450 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BDZ46436
LinkDB
All DBs
Position
2164689..2166152
Genome browser
AA seq
487 aa
AA seq
DB search
MDFAERYRVISAKDPRFDGQFVTAVSSTGIYCRPSCPARTPRPENVTFFPTSAAAHAAGY
RACKRCLPEAVPGSPEWNARGGLAARAMRLIGDGVIERAGVPGLAAHLGYTPRHLTRVLT
DELGAGPLALARALRAQNARTLLVSTALPVTDVAYAAGFASVRQFNDTLREVFDLTPTQI
RARGRGPETGPPGRVDLRLPFREPFDAEGIFTFLAARALPGVEVATATSYGRALQLPGGV
ATFELRWTEDRELRLSATVHELRDLPVLLARVRRLFDLDADPVGIDAALEQGPLQPQVAG
IRLPGAVDGGEILLRAIAGQQVTVVQAIGMLGRVAERAGEPIESSLPGVERLFPSPARFA
DEVGHVYRGPASRLRTLQEAARRLADGTLGLHAGLDEAELSARVTALPGVGAWTAGYTAM
RVLGAPDVLLTGDAAVRTGARVLGIPEPLSDSLRRYAPWRSYACLHLWRTAARAGRQASR
TRKETTP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtggacttcgcggagcggtaccgggtcatctcggccaaggacccgcgattcgacggccag
ttcgtcaccgcggtgagctcgaccggcatctactgccggccctcctgcccggcgcgcacg
ccccggccggagaacgtcaccttcttccccacatcggcggccgcccatgccgccggctac
cgcgcgtgcaaacggtgcctgcccgaggccgtgcccggcagccccgagtggaacgcgcgc
ggcgggctcgccgcccgtgcgatgcggctgatcggcgacggggtgatcgagcgggcgggc
gtgccggggctcgccgcgcacctcggctacaccccgcggcacctcacgcgcgttctcacg
gacgagctgggcgcaggtccgctcgcgctcgcccgcgccctcagagcgcagaacgcgcgg
acgctgctcgtctccaccgcgcttcccgtgaccgacgtggcctacgccgccgggttcgcg
agtgtccgccagttcaacgacaccctccgtgaggtgttcgatctcacgccgacgcagatc
cgagcgcgtgggcgcggccccgagaccggcccgcccggccgggtcgacctgcggctcccg
ttccgtgagccgttcgacgcggaggggatcttcaccttcctcgcggcccgggcgcttccc
ggcgtggaggtcgcgacggcaacgtcgtacggccgcgcgctccagctcccgggtggcgtc
gcgacgttcgagctgcgctggacggaggatcgcgagctgcgcctgtcggcgacggtgcac
gagctgcgcgacctcccggtgctgctggcgcgcgtgcggcggctcttcgacctcgacgcg
gatcccgtcggcatcgacgccgctctcgagcagggaccgctgcagccccaggtagccgga
atccgcctgccgggcgccgtcgacggcggcgagatcctgctccgcgccatcgcgggtcag
caggtgaccgtcgtgcaggcgatcggcatgctcggccgggtcgccgagcgggcgggggag
ccgatcgaatcctcgctccccggcgtcgagcggctgttcccctctcccgcgcggttcgcg
gacgaggtcgggcacgtctaccgcggacccgcgagccggctgcggacgctgcaggaggcc
gctcgccgcctcgccgacggcaccctcgggctgcacgcggggctggacgaggcggagctg
tccgcgcgcgtcacggcgcttcccggggtcggggcctggacggccgggtacaccgccatg
cgcgtcctcggcgcaccggacgtgctcctgacgggagacgcggcggtccgcaccggcgcc
cgggtgctcggcatccccgaacctctcagcgactcgctgcgccggtacgcgccctggcgc
tcatacgcctgcctgcacctctggcggaccgcagcgcgtgcgggccgccaggcttcccga
acccggaaggagaccaccccatga
DBGET
integrated database retrieval system
